Sesamum indicum (sesame): 105156511
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Entry
105156511 CDS
T04135
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105156511
04120 Ubiquitin mediated proteolysis
105156511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105156511
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105156511
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105156511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING-like
zf-HC5HC2H
Prok-RING_4
PHD_NSD
zf-C3HC4_4
Zn_ribbon_8
CDK2AP
Motif
Other DBs
NCBI-GeneID:
105156511
NCBI-ProteinID:
XP_011070965
UniProt:
A0A6I9SN29
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Position
LG2:complement(17010834..17015576)
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AA seq
537 aa
AA seq
DB search
MMKLQTYAGLSLIATLAVIYHAFSSRGQFYPAMVYLSTSKISLALLLNMGLVVMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLALVTALLLIKALHWLA
QKRVEYIETTPSVPKLSHIRIVSFLGFLLLVDSIFLYNSVKFLVKTRKASVSLFFAFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELVRDLLHLTMYMCFFLVIFVNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNSSDVTCIICREEMT
VAKKLNCGHLFHVHCLRSWLERQNTCPTCRALVVPPENGTSTSGLRGDGHQRGTSIPGTP
TQGSVGDRVANDNVSHHQARLQAAATAASIYEKSFVYPSPNTLSWSPGYTLLPQTFGHCG
NNVVASDGEDGAVSGLSQEHQLANMVFPQLPQGSFVPPQFQGFNGHFASGNASEHDLQVK
LIEHQIEFLQRQLELLQTSSSGKGKDLGTSDIKGKTISSPSSSTVDSSETGNAAATD
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacttatgctgggcttagcttaatagctacattggctgttatttat
catgcctttagtagtagaggccagttttatcccgcaatggtttacttgtcgacttcaaag
atcagcttggcacttcttttaaatatgggcctggttgttatgtgcattttgtggcaattg
accaagaaaatcttccttggctcactgcgagaagcggaagttgaaaggctgaatgagcaa
tcgtggcgggaagtcatggaaatactttttgcaatcactatcttcagacaagatttttca
gttacatttcttgcattagttactgctttacttctgatcaaggctttgcattggttggcc
caaaagagagttgaatacattgaaacaactccatctgtccctaagctctctcacatccgc
atcgtgtctttcttgggattcctcctccttgttgacagtatctttctctataactcagtc
aagtttttggtaaaaaccagaaaggcatcagtttcacttttctttgcatttgaatacatg
atattggccacaacaactgtatcaacgtttgtgaagtatgtattctacgtcagtgacatg
cttatggaaggacaatgggaaaagaaagctgtctacaccttctacttggagcttgtccga
gacttgctccacttgactatgtatatgtgcttcttccttgtcatttttgttaattatggc
gtgcctcttcacttgattcgggagctgtacgagacgttccgcaattttaaaatacgtgtg
gctgattacatacgttatcggaagatcacgtcaaatatgaatgatcgcttcccagatgca
acacctgaagagctcaattcaagtgatgtgacctgcattatatgccgtgaggagatgact
gtagcgaagaaacttaattgtgggcatctttttcatgtccactgcctcaggtcgtggtta
gaaagacaaaatacatgccctacatgcagagcgcttgttgtaccacctgaaaatgggacg
tcaacttctggattaaggggcgatggtcatcagcgaggaactagcattcctggtacacct
acgcaaggctctgtcggtgatagagtggcaaatgataatgtcagtcatcatcaggctagg
ctccaagctgccgcaactgctgcctcgatatatgagaaatcttttgtctatccttctcca
aatactctatcgtggtctcctggatataccttacttcctcaaacatttggacattgtggc
aacaatgtagtggcaagtgatggtgaagatggagctgtgagtggactgtctcaagagcat
cagcttgctaacatggtctttcctcagttacctcagggcagttttgtccctccacagttc
cagggattcaatggacattttgcttcagggaatgcatctgaacatgatttacaagtcaaa
ctaattgaacaccagattgagtttctgcaacgtcagctggagcttctgcaaacatccagt
agtggaaaggggaaggatctaggaacatctgatatcaagggaaaaacaatatcatcacca
tcttcatctactgtagactctagtgagacgggcaatgcagctgccacagactaa
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