Sesamum indicum (sesame): 105156556
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Entry
105156556 CDS
T04135
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105156556
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105156556
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Uteroglobin
DUF7229
Motif
Other DBs
NCBI-GeneID:
105156556
NCBI-ProteinID:
XP_011071024
UniProt:
A0A6I9SN82
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Position
LG2:complement(17367620..17369604)
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AA seq
441 aa
AA seq
DB search
MALNNQISSLLLLFLLFSLSATLPKACAKIATFDEDLQKRAAESYQESLQEYNPNPQDLT
DEFNELVGKTLMNENVTRRNLGEDDCKATNPIDRCWRCDRDWAKHRKRLADCVRGFGHLT
TGGKAGRYYLVDDPSDDDMDHPKPGTLRHAILQTEPLWIIFKHSMVIKLKNELIMTSDKT
IDGRGVLVHIAYGAGITIQFVHNIIIHNIWIHNIVPTSGGMIRDTLSHIGLRTKSDGDAI
NIYSSNRIWIDHVSLSKGYDGLIDVIEGSTAITISNCKFNHHNDVMLLGAHDSHSIDAIM
QVTVAFNRFGKGLIQRMPRVRWGFAHVVNNDYSHWELYAIGGSAHPTIISQGNRFRASNY
RYTKEVTKRDYATKDQWMKWQWRSEGDLFKNGAFFTESGQPLEHSKSPLVGMNLIRYRPG
SFVGTLTKYAGALKCRKGKLC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaacaatcaaatatcatccttactcttgctctttctcctattctcactttct
gcaacgctgccgaaagcgtgtgctaagatcgccactttcgacgaggatctgcagaagcgg
gccgccgagtcctaccaggaatccctccaggaatacaacccaaatcctcaggatctcact
gatgaattcaacgaactagttggcaagactttgatgaatgaaaatgtcacaagaaggaac
ctgggagaagatgactgcaaggccacgaaccccatcgaccggtgctggcggtgtgaccgc
gactgggctaaacaccggaagaggcttgctgactgtgtccgaggctttggccacctcaca
actggaggtaaagcgggaaggtattatctggtggatgacccttcggacgacgatatggac
cacccaaagcccggaacgcttcgccatgctattctgcagacggagcccttgtggatcatc
ttcaaacacagcatggtcattaagctaaaaaatgagctgattatgactagtgacaagacc
attgatgggagaggagtgctagttcatattgcctatggagcaggcattactattcagttt
gtgcacaacattataatccataatatttggattcataacattgttcctacctccggcgga
atgatcagagacacactgtcgcacatagggctacgtaccaagtccgatggggatgccatt
aacatctatagctcaaacagaatatggatcgatcatgtttccttgtctaaaggttatgat
gggctcattgatgtgatcgagggttccacagccatcaccatctccaactgcaaattcaac
caccataatgatgtgatgctcttgggtgcacatgacagtcattctatagatgcaattatg
caagtgacggttgcgttcaacaggttcggaaaaggtttgattcagaggatgccgagagtc
cgatggggtttcgcccatgtggtgaacaatgactactcgcattgggaattatacgccatc
ggtggaagcgctcaccccaccatcataagccagggcaacagatttagggcctcaaactac
cgatacacgaaggaggttactaaaagagattatgctaccaaggaccaatggatgaaatgg
caatggcggtctgagggggacctgttcaagaatggagccttctttactgaatcagggcaa
ccacttgaacatagcaagagtccactggtagggatgaacttgatcaggtacaggcctgga
tcattcgttggaaccctcacaaaatatgctggtgctctcaagtgccggaaaggcaaactc
tgctaa
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