Sesamum indicum (sesame): 105156628
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Entry
105156628 CDS
T04135
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105156628
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105156628
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105156628
NCBI-ProteinID:
XP_011071123
UniProt:
A0A6I9SME5
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Position
LG2:17847788..17850398
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AA seq
472 aa
AA seq
DB search
MKKAKTSSLVFLFLLWLFVLTALSTISIEARKNHGKKSKMHKSKRHNQNSPPNRANSPAS
APAPLPQFGTYPTQSRVFNILSFGAKANGVSDDSKALLAAWKSACKVPGGVVAIPAGLKF
LIKPVTLQGPCMPNLVLQIDGTLLAPPKIGSWPKSSLYQWINFKWLQNFTVQGAGTADGQ
GSNWWSSSQNDQKKRVKCIPAMKPTALRFYEGYNVTVRDIRIINSPLCHLKFDNSKRVKV
NNVTISAPESSPNTDGIHLQNSQDVEILHSDIGTGDDCVSIQTGCSNIHVHHINCGPGHG
IXXXXXXXDKSVACVSNIVVENIIMQNTLYGARIKTWQGGLGSVKNVTFSNIQVSDVKVP
ITIDQYYCDKNVCKNQTGAVAISGVTFNQIIGTYAVQPIHLACSNSIPCTDVDLISIRLE
PSPQYRGFQQALCWNSYGKSFGPLAPASMDYCVRSGSDFVKRIARSHDASCW
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccaaaacctcatctcttgtcttcctctttctgctttggctttttgttctc
actgcactttcgaccatatcgattgaggcaagaaagaaccatggcaagaaaagtaaaatg
cataagagtaagagacataatcagaacagccctccaaaccgtgcaaactcaccggcttct
gcaccagctcctttgcctcagtttggtacctatccaactcagtcgcgtgtgttcaacatt
ttgtcgtttggagctaaggctaatggagtttctgatgactccaaggcacttctagcagcg
tggaaatctgcttgcaaggtacccggaggtgttgtggcaatacctgcagggttgaagttt
ctgatcaaacctgtaacacttcaagggccatgtatgccgaatcttgttttacagatagac
gggactcttttagcgcctccaaaaatcgggtcatggccaaaatctagcttatatcaatgg
ataaatttcaagtggcttcagaattttactgtccagggtgcaggcacagctgatggccaa
ggctcaaactggtggagttcttcacagaatgaccaaaagaaaagagtgaaatgtattcca
gccatgaaaccaactgcattgagattctatgaaggctataatgtcacggttcgtgatatt
agaatcataaatagtcctttatgtcacctaaaattcgacaactctaaaagagtgaaggtc
aacaacgtcactatttctgctcctgaaagcagcccaaatactgatggaatccacctgcag
aactcccaagatgtcgaaatactgcattctgatattggaaccggagatgattgtgtgtct
atacaaacaggttgttccaacattcatgtccatcatataaattgtggccctggtcatgga
atannnnnnnnnnnnnnnnnnnnagacaaaagtgttgcatgtgtctccaacattgtagtc
gagaatatcataatgcagaacactctatacggtgcaaggatcaaaacatggcagggaggt
cttggatcagtgaaaaacgtgacattttccaacatccaggtctctgatgttaaggttcca
ataactattgatcagtactattgtgacaagaacgtgtgcaagaatcaaacaggggcagtg
gcaatatcaggagttacgtttaatcagataatcgggacatatgctgtgcagcctatccat
ctagcctgcagcaattcaattccatgcacagacgtggatttgatttccatccgactggaa
ccctcaccgcaataccgcggatttcagcaagcattgtgctggaattcttatggcaaatca
tttgggccccttgctcctgcaagcatggactattgtgtaagaagtggaagtgattttgtc
aagagaatagcaagatcccatgatgctagttgttggtaa
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