Sesamum indicum (sesame): 105157749
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Entry
105157749 CDS
T04135
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105157749
03083 Polycomb repressive complex
105157749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105157749
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105157749
Histone modification proteins
HAT complexes
HATB complex
105157749
HDAC complexes
Sin3A-HDAC complex
105157749
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105157749
PRC2.2
105157749
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105157749
Heterochromatin formation proteins
Other heterochromatin formation proteins
105157749
Chromatin remodeling factors
NuRD complex
105157749
NuRF complex
105157749
NuRF complex (fruit fly)
105157749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
105157749
NCBI-ProteinID:
XP_011072513
UniProt:
A0A6I9SRJ9
LinkDB
All DBs
Position
LG3:complement(8846738..8864539)
Genome browser
AA seq
459 aa
AA seq
DB search
MSKRTPQPAADKSYVNWKTLIPVLYDWFANHNLVWPTLSCRWGERFNEVTYKNNQRLYLS
ERTDGSLPNTLVIATAEVVKSRVAAAEHISQFSEDARSPFIKKHKTILHPGEVNRIRELP
QNNYIVATHTDSPDVLIWDVENQPNRQCVAGAKASCPDLILTGHQDNAEFALSMCSAEPF
VLSGGKDKSVVLWSIHDHVSSLAANRRARQFPGSKDDAVTGRTGYGSTVQARGIFQGHDD
NVEDVQFNPSSAREFCSVGDDSCLILWDARTGYSPVLKVEKAHSADIHCVDWNPNDLNLI
LTGSADNTVCMYDLRKLTSGGVKSPIHIFEGHAAAVLCVQWSPMKASVFGTSAEDGILNI
WDHSKIGNMEGGSGTGNLGSPGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDAANNGGG
GTLQIWRIIDFLYRAEDDVVNEMGNYRSHILPCSSSRRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagaacaccacagccggcggcggacaagagttacgttaattggaaaacacta
attcctgtcctatatgattggtttgccaatcacaaccttgtgtggcctactctttcttgc
cgttggggagagcgattcaatgaagtaacctacaagaacaatcagcggctatacctctct
gaacggactgatggcagccttcctaatacacttgtcatagcaactgctgaagttgtcaaa
agtcgggttgcagcagcagagcacatatcacagttcagtgaagatgctcgttcacctttt
atcaagaagcacaagaccatccttcatcctggcgaggtgaatcgaatcagggaactgcca
cagaataactacattgtggctactcacactgacagtcctgatgtcctcatttgggatgtt
gaaaaccaacccaatcgtcagtgtgttgcgggcgccaaagcgtcttgcccagacctgata
ctgactggacatcaagataatgctgaatttgctctatccatgtgctctgcggaacccttt
gtgctctctggagggaaggataagtctgtggttttgtggagcatccatgaccatgtatca
tctttggcagccaatcggagagctcgacagtttccaggctctaaggatgatgctgtcact
ggtaggactggatatggctccacagttcaagctcggggaattttccaaggacacgacgat
aatgttgaagacgtccagtttaatccgtcgagtgcccgggagttctgtagtgttggtgat
gactcttgcctcatactgtgggatgcaagaactggttattctcctgtcttaaaggttgaa
aaggctcacagtgctgacattcattgtgttgattggaatcctaacgatctcaatctaatt
ttgactggatctgctgataatactgtttgcatgtatgaccttcgcaaacttacttctgga
ggagttaaatcccccattcacatatttgaaggccatgctgctgctgtcctgtgtgtgcag
tggtccccaatgaaagcttctgtatttggcacttctgcagaggatggtatcttgaatatc
tgggatcactcaaagattggcaacatggagggcggttctggaacaggaaatttgggttcg
ccaggcttattctttcaacatgcagggcacagggataaggtcgtcgattttcattggaat
gcatcagacccgtggactattgttagtgtatctgatgatgcagctaacaatggcggcggt
ggaacactacagatatggcgaataattgactttctctatcgggcggaagacgacgttgtt
aatgagatgggcaattacagatctcacatactgccatgctcttcctctaggaggaaatga
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