Sesamum indicum (sesame): 105157797
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Entry
105157797 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105157797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105157797
03036 Chromosome and associated proteins [BR:
sind03036
]
105157797
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105157797
Coactivators
SAGA/TFTC/STAGA complex
105157797
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105157797
STAGA complex
105157797
TFTC complex
105157797
SAGA complex
105157797
SLIK complex
105157797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
105157797
NCBI-ProteinID:
XP_011072579
UniProt:
A0A6I9STC8
LinkDB
All DBs
Position
LG3:9217827..9225251
Genome browser
AA seq
604 aa
AA seq
DB search
MSFAGMNSIQQQPPQQNSNVSISSTNNNQQQQQQMGQQNQLPQSQMGQQHQLQQPQIGQQ
NQLQQPQIGQQSQQQQQQQQLGQQSQLQQQQLGQQSQLQQQQLGQQSQLQQQQMAQQNQL
QQQQMAQQNQLQQQQMGQANQLQQQQMGQQNQLQQQQMGQIGSGNLPRSALMGQTGHLPM
LSGQAAAAAAQFNLQNQFLTSPRQKTGFMQGSQFHPGNSPGQSLPGMQAMGMMGSLNLSS
QLRANGMHAYAQQRMTPSQLRQQLSQQNALTAGQGQNITRTSFMNAQIAGLAQNGQPGMM
QNAISQQQWLKQMPAISSPNSSSFRLQQHRQQQLLIQQQLASSQLHQNSVGLNAQQLSQI
VQQQTQMGHPQVHQQKQQQLQQQPMQQQXPQQQPASQQLFHQQQSPRMVAPGGQKSVSLT
GSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQLDVNGKLDPEVEDLLLEIAD
NFIDSVTTFACTLAKHRKSSTLESKDVLLHLEKNWKLTIPGFSSEERRHVTDHPPSDAHK
KRLDVIRTLMEPVQSDTNDNAKQMARQGPSDPVGPNHMIRPSPSSEQLVSQSAVPQMLQQ
TTRF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgccggaatgaactcaattcagcaacagccgccgcaacagaacagtaatgtt
agtatcagtagtactaataataatcagcagcaacagcagcaaatggggcagcagaatcag
ttgccgcaatcgcaaatggggcagcagcatcagctgcagcaaccgcaaatagggcagcag
aatcagctgcagcaacctcaaatagggcagcagagtcagcaacagcaacagcaacagcaa
ttggggcagcagagtcagctacagcagcagcaattggggcagcagagtcagctacagcag
cagcaattggggcagcaaagtcagctacagcagcagcaaatggcacagcagaatcagttg
cagcaacagcaaatggcacagcagaatcagttgcagcaacagcaaatggggcaggcgaat
cagttgcagcaacagcagatggggcagcagaatcagttgcagcagcagcaaatggggcag
ataggcagtggcaatttgccgaggtctgcgctaatgggccaaacagggcatctgccaatg
ttgtctggtcaagcggctgctgctgctgcccagtttaatttgcaaaatcagtttttgaca
tcgccacggcagaagactggattcatgcaagggtctcagttccatcccggtaattctcct
gggcagtccttgccagggatgcaagccatgggaatgatggggtctctcaacttgagttct
caacttagagcgaatgggatgcatgcttatgctcagcaaaggatgacacccagccaactg
aggcagcaactgtcacagcaaaatgcccttactgctggtcagggacaaaatataacgagg
acgtcatttatgaatgctcaaattgctggactggctcagaatggacaaccaggtatgatg
cagaatgctatatctcaacagcagtggttaaagcaaatgccagcaatatcctctcccaat
tcttcttcatttcgtcttcaacaacatcggcaacaacaactgcttatccagcagcagcta
gcttcttcacagttgcatcagaattcagtgggactgaatgcacaacagttgtcccaaata
gttcagcagcaaacgcagatgggccatccacaggtgcatcaacagaaacaacaacagctg
cagcaacagccgatgcagcagcagntgccgcagcagcagcctgcatcccagcaacttttc
catcaacagcagtctccaagaatggtggcccctggaggccagaaatctgtaagtttgaca
ggatcacagccagatgctactgcatctggaacaactacaccaggtgggagttcaagtcaa
ggcacagaagcaagcaaccaacttcttggaaagagaaaaatacaagatctagtatcacag
ttggatgtaaatgggaaactggatcctgaagtcgaagacctccttttagagattgctgat
aactttattgattcggttactacatttgcatgcaccctggcaaagcatcggaaatcttca
actttagaatccaaagatgtgttgctgcatctagaaaaaaactggaagttgacaattcct
gggttttcgagtgaagaaagaagacacgtcacagaccatcctccaagtgatgcccacaag
aagcgtctggatgtgatacgtaccttaatggagcctgtacaatctgataccaatgataat
gctaagcagatggccaggcagggacctagcgacccagttggtccaaaccacatgataagg
ccttctccaagttccgagcagttggtttcacaatctgctgtgccccagatgctgcaacag
accactagattctag
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