Sesamum indicum (sesame): 105157797
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Entry
105157797 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105157797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105157797
03036 Chromosome and associated proteins [BR:
sind03036
]
105157797
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105157797
Coactivators
SAGA/TFTC/STAGA complex
105157797
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105157797
STAGA complex
105157797
TFTC complex
105157797
SAGA complex
105157797
SLIK complex
105157797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
105157797
NCBI-ProteinID:
XP_011072579
UniProt:
A0A6I9STC8
LinkDB
All DBs
Position
LG3:9217827..9225251
Genome browser
AA seq
604 aa
AA seq
DB search
MSFAGMNSIQQQPPQQNSNVSISSTNNNQQQQQQMGQQNQLPQSQMGQQHQLQQPQIGQQ
NQLQQPQIGQQSQQQQQQQQLGQQSQLQQQQLGQQSQLQQQQLGQQSQLQQQQMAQQNQL
QQQQMAQQNQLQQQQMGQANQLQQQQMGQQNQLQQQQMGQIGSGNLPRSALMGQTGHLPM
LSGQAAAAAAQFNLQNQFLTSPRQKTGFMQGSQFHPGNSPGQSLPGMQAMGMMGSLNLSS
QLRANGMHAYAQQRMTPSQLRQQLSQQNALTAGQGQNITRTSFMNAQIAGLAQNGQPGMM
QNAISQQQWLKQMPAISSPNSSSFRLQQHRQQQLLIQQQLASSQLHQNSVGLNAQQLSQI
VQQQTQMGHPQVHQQKQQQLQQQPMQQQXPQQQPASQQLFHQQQSPRMVAPGGQKSVSLT
GSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQLDVNGKLDPEVEDLLLEIAD
NFIDSVTTFACTLAKHRKSSTLESKDVLLHLEKNWKLTIPGFSSEERRHVTDHPPSDAHK
KRLDVIRTLMEPVQSDTNDNAKQMARQGPSDPVGPNHMIRPSPSSEQLVSQSAVPQMLQQ
TTRF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgccggaatgaactcaattcagcaacagccgccgcaacagaacagtaatgtt
agtatcagtagtactaataataatcagcagcaacagcagcaaatggggcagcagaatcag
ttgccgcaatcgcaaatggggcagcagcatcagctgcagcaaccgcaaatagggcagcag
aatcagctgcagcaacctcaaatagggcagcagagtcagcaacagcaacagcaacagcaa
ttggggcagcagagtcagctacagcagcagcaattggggcagcagagtcagctacagcag
cagcaattggggcagcaaagtcagctacagcagcagcaaatggcacagcagaatcagttg
cagcaacagcaaatggcacagcagaatcagttgcagcaacagcaaatggggcaggcgaat
cagttgcagcaacagcagatggggcagcagaatcagttgcagcagcagcaaatggggcag
ataggcagtggcaatttgccgaggtctgcgctaatgggccaaacagggcatctgccaatg
ttgtctggtcaagcggctgctgctgctgcccagtttaatttgcaaaatcagtttttgaca
tcgccacggcagaagactggattcatgcaagggtctcagttccatcccggtaattctcct
gggcagtccttgccagggatgcaagccatgggaatgatggggtctctcaacttgagttct
caacttagagcgaatgggatgcatgcttatgctcagcaaaggatgacacccagccaactg
aggcagcaactgtcacagcaaaatgcccttactgctggtcagggacaaaatataacgagg
acgtcatttatgaatgctcaaattgctggactggctcagaatggacaaccaggtatgatg
cagaatgctatatctcaacagcagtggttaaagcaaatgccagcaatatcctctcccaat
tcttcttcatttcgtcttcaacaacatcggcaacaacaactgcttatccagcagcagcta
gcttcttcacagttgcatcagaattcagtgggactgaatgcacaacagttgtcccaaata
gttcagcagcaaacgcagatgggccatccacaggtgcatcaacagaaacaacaacagctg
cagcaacagccgatgcagcagcagntgccgcagcagcagcctgcatcccagcaacttttc
catcaacagcagtctccaagaatggtggcccctggaggccagaaatctgtaagtttgaca
ggatcacagccagatgctactgcatctggaacaactacaccaggtgggagttcaagtcaa
ggcacagaagcaagcaaccaacttcttggaaagagaaaaatacaagatctagtatcacag
ttggatgtaaatgggaaactggatcctgaagtcgaagacctccttttagagattgctgat
aactttattgattcggttactacatttgcatgcaccctggcaaagcatcggaaatcttca
actttagaatccaaagatgtgttgctgcatctagaaaaaaactggaagttgacaattcct
gggttttcgagtgaagaaagaagacacgtcacagaccatcctccaagtgatgcccacaag
aagcgtctggatgtgatacgtaccttaatggagcctgtacaatctgataccaatgataat
gctaagcagatggccaggcagggacctagcgacccagttggtccaaaccacatgataagg
ccttctccaagttccgagcagttggtttcacaatctgctgtgccccagatgctgcaacag
accactagattctag
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integrated database retrieval system
