Sesamum indicum (sesame): 105157937
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Entry
105157937 CDS
T04135
Name
(RefSeq) pumilio homolog 5 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
sind
Sesamum indicum (sesame)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
DUF445
Motif
Other DBs
NCBI-GeneID:
105157937
NCBI-ProteinID:
XP_011072778
UniProt:
A0A6I9SYH0
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Position
LG3:9897784..9906534
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AA seq
1000 aa
AA seq
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MATEDPMRIVDTAAPANWPPSTPTVSFASSPTTVVTDELGLLLRRQNIQTHPTNLAPNRS
GSAPPSMETSFAASAHLSSFPTLTTGLENFQSKHLLPPDSLYSTYQHLNTNLDSTLVPPT
ILTENIHLPRHAGVSGNNWRLPYVDDHGIGSVYVPRSSLSTHEEEPEDDRSPEGASDDRA
KSSRFMLQQKTLAFNGRHKSLVDLIQEDFPRTPSPVFSQSRPSSHVDDPSDRDLKSLSLD
SLSYKGSKSPEPKSGIGSGCKIEISTGSTATIDLSTASVPISSTQDTPGRSLSPEKDGIT
SKDAYFTSDFVSGDAIGSDASRNLHKVEDDQDKLELGLDEQNELHLKNTYSRRSAVFHVP
KSQVQETGQRANTNHMEKVPHGHLKITSVEMHQLPRVPGVPPPLYATTPAYMAPGNSFYA
NFGASGLYSPQYSGYAMGSSFLPPYLAGYPPHTGFPFHFNANSGQSFSVQSAGIPTGERV
SKGSVMQSLNRFYGHPGLTPHPTFSDPPSMQYFQQIVQDPYGVALQYSNLPSPGMISSQV
DSFALRNNPTTAAYTGDQKFQLPHSGSVSIPSPRKIGVPGSSYLSSPTGLGFVPQFPASP
LGSSVLPESPVVGSTSLGKRYDIGHSQSSARTVGGYAGWQGQRGVESIDHRKHSFLEELK
ASNARRIDLSDIVGRIVEFSIDQHGSRFIQQKLESCSVEEKESVFKEVLPHSSKLITDVF
GNYVIQKFFEHGTYEQRKELASQLSGQMLPLSLQMYGCRVIQKALEVIEVDQKTQLVLEL
DGHVMRCVRDQNGNHVIQKCIECVPAERIGFIISAFQGQVAILSTHPYGCRVIQRVLEHC
SDDLQCQSIVDEILESAYDLAHDQYGNYVTQHVLERGRPSERSRIISKLSGKIVQMSQHK
YASNVVEKCLAFGDAAEREVLIEEILVQSEGNDNLLTMMKDQFANYVVQKILDISNDKQR
ETLLGRVRLHLVALKKYTYGKHIVARFEQMTCEDDGIPQP
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgaagaccctatgagaattgtggacaccgctgcccctgcaaactggccacca
tctactcccactgtttctttcgcctcctcccccactactgtggtaactgatgaactggga
ttgctgcttcgaagacaaaacattcaaacacatccaactaaccttgcccccaaccgcagt
ggtagtgcacctccaagcatggagacctcatttgcggcttctgctcatctttccagtttc
ccaactttgaccaccggcttagaaaattttcagtccaaacatctgctgccacctgattcc
ttgtattcaacataccagcatttgaatactaatttggactcaacacttgttccacctacc
attttgacggaaaacattcacctaccacgccatgctggggtttccggaaataactggaga
ttaccatacgtggatgatcatggcattggatctgtttatgtgcccagaagctccctttcc
actcatgaggaggagcctgaagacgatagatcacccgagggagcatcagatgatagagcg
aaaagtagtaggttcatgcttcagcagaagacattggcatttaatggtcgtcataaaagt
ttggttgatcttatacaggaggactttcctcgaacaccttcacctgtatttagccagagc
cgtccgtcaagccatgttgatgacccatctgaccgtgatctgaaaagcctgtcactggat
tcactttcctacaaaggctcgaagtcacctgaaccaaagtcaggcataggttctggttgt
aaaattgaaatctctacaggatcaacagcaacaatcgatctttcaacagcctccgttcct
ataagttctactcaggataccccaggaaggtctctttccccagagaaggatggaataact
agcaaggatgcatattttactagcgattttgtgagtggtgatgctattggttcagatgct
tccagaaaccttcacaaagtggaggatgatcaagacaaactggaactaggacttgatgag
cagaatgagttgcatctaaagaatacttattctcggcgttctgcggttttccatgttccc
aagtctcaagtacaagaaactggccagcgagcaaataccaatcacatggagaaagtcccc
catggacatctcaagatcacctcggtagagatgcaccagcttcctcgtgttcctggagtc
cctcctcctttatatgcaactactccagcttatatggctccaggaaattctttttatgcc
aatttcggtgcatctggtctgtattctccacagtacagtgggtatgctatgggttcctca
tttcttcccccatacctggctggatatccacctcatacaggttttccttttcattttaat
gccaattctggacaaagttttagtgttcaaagtgccggtattcccactggggaaagggtc
tcaaaagggtctgttatgcagagcttgaacaggttttatggccatcctggactaacacct
caccccaccttttcagatcctccttcaatgcagtatttccaacaaattgtgcaagatcca
tatggtgtcgctttgcagtatagcaatttaccatcacctggtatgattagcagccaagtt
gattcctttgccttacgaaataatccaactactgctgcttatacaggtgatcagaaattc
cagttaccccatagtgggagtgtcagcattccaagtccaaggaaaattggggtaccaggt
agcagttacctcagcagtcctacaggtctgggatttgtgcctcaatttccagcatcacct
cttggtagttcagtcctgccagagtctccagtcgtaggctcaacttcattgggaaaacga
tatgatattggacattctcaaagttcagccagaactgttggtggttatgctggttggcaa
ggacaaagaggagttgagagcattgaccatagaaaacattcttttcttgaagaactgaaa
gcaagcaatgctaggagaattgatctctctgatattgttggtcgtattgttgaattcagc
attgatcaacatgggagtcgatttattcaacagaagttggaaagttgtagtgttgaagaa
aaggagtcagtttttaaggaagttcttccacattcttcaaagttgataacagacgtcttt
ggaaactatgttattcagaagttctttgagcatggaacttatgagcagaggaaggaactt
gcaagccaattatcagggcagatgctacctttaagtttgcaaatgtatggttgccgtgtt
atacagaaggcgctggaggttattgaagttgaccagaagacgcaacttgtgctcgaactt
gatgggcatgttatgagatgtgtacgagatcaaaatggaaatcatgtgatacaaaaatgt
attgaatgtgttcctgcggaaagaattggatttatcatctctgccttccaaggacaagta
gctatattatctacccatccctatggttgccgagtcattcagagagtgctggagcattgc
tcggatgacttacaatgtcaatctatagtggatgagatactcgaatctgcatatgatctt
gctcatgatcagtatggcaactatgttacacagcatgttttggaaagggggagaccatct
gaaaggagtcgaattatcagcaagttatctgggaaaattgtacagatgagccagcataag
tatgcgtcaaatgttgtggagaaatgcttagcttttggtgatgctgctgaacgggaagtc
ttgattgaggagattcttgtgcaatctgagggcaatgacaatttactgacaatgatgaag
gaccagtttgcaaattacgtagtccagaagattcttgatattagcaatgataagcaaagg
gaaacattgcttggtcgagttcggcttcatcttgttgctttgaagaaatatacttacggg
aaacacatagttgcacgctttgaacagatgacttgtgaagatgatgggatacctcagcct
tag
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