Sesamum indicum (sesame): 105157947
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Entry
105157947 CDS
T04135
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105157947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105157947
Membrane trafficking [BR:
sind04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
105157947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Pox_EPC_I2-L1
DUF5741
Fusion_gly
Adeno_E3
DUF2116
Motif
Other DBs
NCBI-GeneID:
105157947
NCBI-ProteinID:
XP_011072797
UniProt:
A0A6I9SR35
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Position
LG3:complement(10001368..10006000)
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AA seq
221 aa
AA seq
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MSQVFDSYERQYCELSANLSKKITSANLLDGEQKKQKISEVIGGFEDGEALIRKMDLEAR
SLSPSVKAMLLAKLREYKTDLNNLKTDVKRITSANANQAARDELLESGMADTSMTSADQR
ARLLMSTERLNQSSDRIRESRKIMLETEELGVSILQDLHQQRQSLLHANSTLHGVDDNIG
KSKKVLSNMSRRMNRNKWIIVGIITILIIAILLVLYFKLTH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtgttcgacagttacgagagacaatattgtgagctgtctgccaatttatcc
aaaaagatcacttcagctaatctccttgatggagaacagaagaaacagaaaatatctgaa
gtaataggaggatttgaggatggcgaggcattgattcgtaaaatggaccttgaggctagg
agcttgtcccccagcgtgaaggctatgcttcttgccaagttgagagaatataaaactgat
ttgaacaatttgaaaacagatgtgaagagaatcacatcagctaatgccaatcaagctgca
cgtgatgagttgttggaatctggaatggcagatacttcgatgacatctgccgaccaaaga
gcgaggctgttgatgtctactgagagactaaatcagtccagtgataggatcagggaaagt
cgaaaaataatgctggaaactgaagagcttggagtctcaattcttcaagatttgcatcag
caacgccaatcccttctgcacgcgaacagcacactccatggtgtggatgacaacatcggc
aagagcaaaaaagttctatctaatatgtccaggaggatgaacaggaacaagtggattatt
gtcggtatcatcacaatcttaattatagcaatacttctagttctttacttcaagttgacc
cattaa
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