Sesamum indicum (sesame): 105158113
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Entry
105158113 CDS
T04135
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105158113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105158113
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105158113
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
105158113
NCBI-ProteinID:
XP_011073052
UniProt:
A0A6I9SSQ0
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Position
LG3:10898101..10912070
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AA seq
931 aa
AA seq
DB search
MATCELNDARQAQGFLSFFKSLPNDPRAIRFFDRRDYYTTHGENATFIAKTYYHTTTAVC
QIGSGSDAISSLSVSKNMFETVARDVLLERADHTLELYEGTGANWRLVKSATPGNLGSFE
EILFANNEMQDSPVIVALIANFRENGCAVGLSYVDLTKRVLGLAEFPDDSHFTNLESALV
ALGCKEILLPVEVAKSSEYRSLNDALSRCGAMVTERKKAEFKGRDLVQDLGRLVKGSMDP
VRDLLAAFELAPAALGCIMSYADLLADESNYGNYKIQRYDLARYMRLDSAAMRALNVMES
KADANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVNEINCRLDLVQAFVEDGALRQD
LRQQLKRISDMERLTRSLEKKRASLVHVVKLYQSSIRLSFIKSALEQYNGQFASLIKERY
LDPLENWTDDNHLNKFIGLVEASVDLEQLENGEYMISSGYDSQLLALKNEQESLEHQIHD
LHRKAANDLDLALDKALKLEKGTQHGYAFRITKKEEPKVRKKLNTQFILIETRKDGVKFT
NIKLKKLSEHYQKVVEEYKNCQKELVARVVQTAATFSEVFEGVAWSLSELDVLLSFADVA
ASSPTPYTRPLITPLDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNM
GGKSTFIRQVGVNILMAQVGSFIPCDNASISVRDCIFARVGAGDCQLRGVSTFMQEMLET
ASILKGATKRSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAH
ENAHEQSSKKFIGVANYHVSAHVDSSTRKLTMLYKVEPGACDQSFGIHVAEFANFPENVV
ALARAKASELEDFSPITIVAPDAKEMGSKRKRNWDPDDVHRGTERARQFLKDFSELPLDK
MDLKQALQHISKLKADLEKDAVSCSWLQQFL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctacttgtgaacttaatgatgccagacaagctcaagggtttctctcatttttcaaa
agcctacccaatgaccctagagccattcgattcttcgaccgtcgggactattataccacg
catggcgagaatgcaactttcattgcaaagacctattaccacactacaactgctgtatgc
caaataggaagtggatctgatgccatttctagtcttagtgtgagtaagaacatgtttgag
acagtggcccgagacgttcttttggagagggctgatcacactctagaattgtatgagggc
actggagcaaattggagacttgtgaagagtgcaacccctggaaatttaggcagttttgaa
gaaattctgtttgctaataacgaaatgcaagactctccagtgattgtggctcttattgca
aatttccgtgaaaatggatgtgctgttggcttgagttatgttgaccttactaagagggtg
cttggattggcagaatttcctgatgatagccacttcacaaatttggagtcagctcttgtt
gcacttggttgcaaagaaatccttttgcctgtagaggttgccaaatctagtgaatataga
tcactaaatgatgcattgtccaggtgtggtgcaatggtaactgaaagaaagaaagctgag
tttaaaggaagggatttggtacaagatcttggtaggctcgtgaaagggtctatggatcca
gtaagagatctccttgctgcatttgaacttgcacctgcggctttggggtgtataatgagt
tatgcagacctacttgcagatgagagcaattatggtaactacaaaatccagagatacgat
cttgctaggtacatgagactggattctgctgccatgagggcactgaatgtcatggagagc
aaagctgatgctaacaaaaacttcagcttatttggtcttttgaatagaacctgtactgca
ggaatgggcaagcgtttactgcacatgtggctgaaacaacctttattggatgtaaatgaa
ataaactgtagactggatttggtacaagcttttgtggaggatggggcactacgccaagat
ctaaggcagcaattgaaaaggatttcagatatggagcgactgacgcggtcactcgagaag
aaaagagcaagtcttgtgcatgttgttaagctttatcagtcaagcatcagactttccttt
atcaaaagcgcactggagcagtacaatggccaatttgcttcattgatcaaggaaagatat
ttggatcctttagaaaactggactgatgataaccatctgaataagttcattggtcttgtg
gaagcttctgtagaccttgaacaacttgaaaatggagagtacatgatttcatcaggatat
gattcacagttattggctctcaaaaatgaacaagagtctctggaacatcagattcatgat
ttgcacagaaaagcagctaatgatcttgatctggctcttgataaagctctcaaattagaa
aaagggacacaacatggatatgcctttaggattacgaaaaaggaggagccaaaagtacgg
aagaagctgaatacccaatttattcttattgaaactcgcaaggatggggtaaaattcaca
aacataaagcttaagaaactaagtgagcactaccagaaggtagttgaagaatataagaac
tgccagaaagaattggttgctagagtggtccaaactgctgcaactttctccgaggtgttt
gaaggagtagcttggtcgctctcagaattggatgttttacttagttttgctgatgtggct
gctagctctccaactccttacacacggccactcatcactccattggatgagggagatatt
attttggaagggagtcggcatccttgcgttgaagctcaagattgggtgaactttatcccg
aatgattgtaaactggttagggggaaaagttggttccagattattacaggaccaaacatg
gggggaaaatcaacgttcatacgacaggttggtgtgaacattctgatggcacaagttggt
tccttcataccgtgcgataatgctagtatttctgttcgtgattgcatttttgctcgtgtg
ggtgctggtgactgccagctacgaggagtttctactttcatgcaagagatgcttgagact
gcatcaatcttgaaaggagcaactaagaggtcgctaataataatagatgagctaggtcgt
ggcacgtcaacgtatgatggatttggcttagcatgggccatttgtgagcacatagttgaa
gtgatagaagcacctacactgttcgctactcactttcatgagctgactgcattagctcat
gaaaatgctcatgagcaatcttcaaagaaatttataggtgtagcgaattatcatgtgagt
gcacatgttgactcgtcaactcgcaagcttaccatgctttacaaggttgaacccggagcc
tgcgatcaaagttttggtatacatgttgctgaatttgctaactttccagaaaatgttgtt
gcccttgcccgagcaaaggcttctgagttggaagatttttcacccatcacaattgtggcc
cctgatgccaaagagatgggttctaaaaggaagcgaaattgggaccctgatgatgtacat
aggggcactgaacgagctcgccagttcttgaaggacttctctgagttgccactggacaag
atggatctgaagcaagcgctacaacacatcagcaaattgaaagctgacttggagaaggat
gcagttagctgttcctggctccagcaattcctctag
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