Sesamum indicum (sesame): 105158155
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Entry
105158155 CDS
T04135
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105158155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105158155
03036 Chromosome and associated proteins [BR:
sind03036
]
105158155
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105158155
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105158155
PBAF complex
105158155
GBAF(ncBAF) complex
105158155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SNAPC3
Motif
Other DBs
NCBI-GeneID:
105158155
NCBI-ProteinID:
XP_011073099
UniProt:
A0A6I9SST9
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All DBs
Position
LG3:complement(12347509..12353224)
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AA seq
610 aa
AA seq
DB search
MDRSSQDLELYTIPSYSSWFSWNNIHEVERFSLREFFDGSSVTRSPRIYKEYRDFIISKY
REDPSRKLTFTEVRKSLVGDISVLLKVFTFLEKWGLINFNVADNSEKNSYEGSARTASFG
VEEEEDNWRGRVKVEEGAPYGVRVVAAPNSMKPIIAPPPPPSVAVDGGGFVGEVGESGFK
WPPLASYSDVYGELMQQEKKKALVCGSCKENCDSAHYQYTKEGSFVLCEKCFKSGNYDKN
KLADDFKYKDSANQAAAWTDAETLLLLESVLKHGDDWDLVAKNVQTKSKLECIAKLIELP
FGDLMLGAGNRKSRYLDVIGDITNSRQSGLASNESQESVKAEDPGPEVKDKEQSRELTDT
DQSPELKDNDNSAEHKDEDLSPELKDEDQQKGDAKNEGPPLKRLRTGPTSDVGNSLMKQV
ARISTMLGPHVTASAADAAVTALCYENQCSREIFDDDDNYVDSKASPETSDQRRVAEVDN
SVEEEEPNQSEIQGISCVKSIIPQNLRTRAATATALGAAAANAKLLADQEEREIGQLVAT
MIEAQLTKLQRKLKYFDDLEQIMGKEHAQLEELEESLIAERINVLQRIFSAGITKPKEQT
STMHQTDVVQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagttcgcaggacttggagctctacaccatccccagctactccagttggttc
tcttggaataacattcacgaagtggagaggttttcactgagagagtttttcgacggaagc
tcagtcaccaggtcacctagaatctacaaggagtacagggatttcatcatctccaagtac
agggaagacccttcgaggaaactgactttcaccgaggtgcggaagtcactggtcggtgac
attagcgttctccttaaagttttcacgtttttggagaaatggggtctcattaatttcaac
gttgctgataatagtgagaaaaatagttatgagggaagtgccaggacggcgtcgtttggg
gttgaggaggaagaagataattggaggggtagggtgaaggtggaagaaggagccccatat
ggggtgagggtggtagcggcgccaaattctatgaaacctataatagcgcctcccccgcct
ccgtctgtggcggtggatggtggtgggtttgttggggaagtgggagaaagtgggttcaaa
tggccgccgttggcttcgtattctgatgtttatggggagttgatgcagcaggagaagaag
aaggctttggtgtgtggaagctgtaaagagaattgtgattcggcccactatcaatacacg
aaggaagggagctttgttctttgtgagaagtgcttcaaaagtggtaattatgataagaac
aaactggcagatgatttcaagtataaagatagtgcgaatcaggcagctgcttggacagat
gcagaaactctacttcttttagaatctgttttaaagcatggagatgattgggatcttgtt
gctaagaatgttcagacaaaaagtaaactggaatgtatcgcaaagcttatagaactgcct
tttggcgatcttatgcttggggctggcaatagaaagagtagatatctggatgtaattggt
gatattactaattctagacaatcagggttagcttctaatgaatcacaagaatcagtgaag
gcagaagacccgggccccgaagttaaggataaggaacagagccgtgagcttactgatacg
gaccagagccctgagcttaaggataatgataacagcgctgagcataaggatgaggatctc
agccctgagcttaaggatgaggatcagcagaagggagatgccaaaaatgaaggtccacca
ctgaaaagattgcgtactggaccaacttcagatgttggaaattctttgatgaaacaggta
gctcgcatctcaacaatgttgggcccacatgttacagcttctgcagctgatgctgctgtt
actgctctttgctatgagaaccagtgttcaagagaaatatttgacgatgatgataattat
gttgactcaaaagcatctcctgaaactagtgatcaaaggagagtggctgaagttgataat
tcagtagaagaggaagagcccaatcaatcagaaattcaggggatatcctgtgtaaagagt
ataataccacagaatttgagaacaagggctgcaactgcaacagcacttggtgctgctgct
gcaaatgctaagttgttagctgatcaagaggagagagagataggacagttggtggctaca
atgattgaagcccagctcactaaattgcagcgcaagctgaagtactttgatgatctggag
caaattatggggaaggaacatgctcaactcgaggaactcgaggaatctctaatagcggag
cgaattaatgtcttgcaaaggatattttctgctggtattaccaaaccaaaggagcaaacc
tcaacgatgcatcaaactgatgtggttcagtaa
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