Sesamum indicum (sesame): 105158330
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Entry
105158330 CDS
T04135
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105158330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105158330
03036 Chromosome and associated proteins [BR:
sind03036
]
105158330
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105158330
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105158330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
105158330
NCBI-ProteinID:
XP_011073355
UniProt:
A0A6I9SVA8
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Position
LG3:complement(13930282..13936697)
Genome browser
AA seq
1044 aa
AA seq
DB search
MEVDVGIIKPIPVPLSQSKRRKISMGSADTALSWQLLPEVENSLPTVRSSDYYTKPCLSE
LAIREFMNPGYCSRVQDFVVGRVGYGHVKFTGETDVRCLDLESIVKFNRCEVVVYEDDSS
KPLVGQGLNKPAEVTLLLKAKSLNNLTEDHLREIVGKLKCKTESQGAEFLSFDPIQGEWK
FLVQHFSRFGLGEEDEEDIPMDDVSAEVQEPAGMNCSEASDVDEETVSVNGTLLSHSLPA
HLGLDPVRMKDLRMLLFSAKEDEVEDLSGMLSHDSPPFAKESSKSPLHHSSRKTVRKMNT
PHIRKTPLALIEYHPGSFSSNSPGAILMAQQNKGLHLTAPKSEGFLLDLKDKTPLTGSHS
RNIVDAALFMGRSFRVGWGPNGMLVHSGMPVGSADSGIVLSSVINVEKVAIDKVTRDESN
KVRAELTDLCFSSPLNLHKDLDHETKKLELGTFGLKLQKLVCNRLTLPDICRRYIDIIER
QLEVPTLSPASRILLMHQVLVWELIKVLFSSRKMGGQVKPVEDEEEDMIPDGRESCPDVD
QEALPLIRRAEFSYWLQESVYHRVQEEVSSLDESSDLEHILLLLTGRQLDAAVELAASRG
DVRLSCLLSEAGGSPANRADIAHQLDLWRKDGLDFSFIEEDRVRLLELLAGNIHRALQGV
KIDWKRFLGLLMWYQLPPDISLPVVFNTYQKLLNEGNAPYPVPVYIDEGPIEDASNWVVN
NHFDLAYYLMLLHARQENDFGALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGTFSSNDL
HVLDMAFVSQLLCLGQCHWAIYVVLHMPHREDYPYLQTAVIREILFQYCEVWSTQESQWE
FIENLGIPSAWLHEALAIYFSYIGDLSKALDHFLECGNWQRAHSIFMISVAHSLFLSGKH
SEIWRLATSMEDYKSEIEDWDLGAGIYISFYLLRSSMQEDSNTMTELDTLENKNDACSDF
IGCLNKSLAVWSSKLSVDARVVYSKMAEEICSLLLSDSGEGSTGEAQLNCFDTVFRGPMP
EDLRSYHLQDAVSLFTCYLSEIAQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgatgtagggataataaaacccattcctgttcctctgtctcagtccaaaaga
agaaaaatttctatgggtagtgcagacactgctctttcatggcagttgttgcctgaagtt
gaaaattctttaccaacagtacgatcttctgattactatacaaaaccttgcttaagcgag
ttggctattcgagagtttatgaatcctggttattgcagcagagtccaagattttgttgtt
ggaagggttggatatggacatgtaaagtttactggggagacagacgttagatgcttggat
ttggagagtatcgtcaagttcaatagatgtgaagttgtcgtatatgaagatgacagttcc
aagcccttagttggccagggtcttaacaagccagctgaagtcaccttactacttaaggca
aaatccttgaataatttgactgaggatcacttgagagaaattgtgggtaagttgaagtgc
aagacagagagtcaaggggcagaatttctttcatttgatccaattcaaggtgaatggaaa
tttttggtgcagcattttagcagatttggcctgggtgaagaagatgaagaggatattccg
atggatgacgtgtctgcggaagttcaagagcctgcaggcatgaattgtagtgaggcatca
gatgttgatgaagaaactgtttcagtgaatgggactctactttcacattctcttcctgct
catcttggtcttgatcctgtgaggatgaaagatttgaggatgttgttgttttctgccaag
gaagatgaggtagaggatctcagcggcatgctttcacatgacagtccaccttttgccaaa
gaatcttctaaatctccattacatcattcctctagaaagacagttcgcaagatgaatacc
cctcatattcgcaagactccattagctttgatagaatatcatcctggaagtttcagctct
aactcccctggagccattttgatggctcaacaaaataaaggtttgcatctaacagctcca
aaatctgaagggtttctgctggaccttaaggacaaaacaccactaactggaagtcattca
cgtaatatagttgatgcagcattgttcatgggtagatcttttcgagtaggatggggcccg
aacggtatgcttgttcattctggaatgcctgttggtagtgctgattctggaattgtatta
tcctctgtgatcaatgttgaaaaggtggcgattgacaaagtgacaagagatgaaagcaat
aaagttagggcggaactcactgatttatgtttcagctctcccctcaatcttcacaaggat
ttagatcatgaaacaaaaaaacttgaactgggaacctttggattgaagcttcaaaagctt
gtctgtaatcgcctgactcttcctgatatttgtcggagatacatagacatcattgagagg
caactagaggtacctactttgtcacctgcttctcgtattttgttgatgcaccaagtactg
gtttgggaattaattaaggttctcttttcctcgaggaaaatgggtgggcaagtgaagcct
gtggaagatgaggaggaggatatgataccagatgggagggaaagttgtccagatgttgac
caggaagcacttccacttattaggcgagcagaattcagttattggctgcaagagagtgtt
taccatcgtgtgcaagaggaagttagttcactagatgagtcaagtgatttagaacatata
ttgttgcttctcactggtcggcagctggatgctgctgtggaactagctgcttctagaggg
gatgtaagactatcttgtcttttgagtgaggctggtggatccccagcaaatcgtgctgat
atcgctcatcagcttgatctttggaggaaagatggactggattttagttttattgaggag
gatagggtcaggcttcttgaattacttgctggcaacattcatagagccttacagggtgta
aaaattgactggaagaggttcttaggactgttaatgtggtatcagcttccacctgacatt
tcattgcctgttgtctttaacacctatcagaagcttcttaatgagggaaatgctccatat
cccgttccagtttacattgatgaagggccaatagaagatgcgagcaattgggttgttaac
aatcattttgaccttgcttattatcttatgcttctccatgccagacaagaaaatgacttt
ggagctttgaagaccatgttcagtgcctttgcctcaacaaatgatccacttgactatcac
atgatatggcatcagcgtgcagttttagaggccattggcactttcagttctaatgatctt
catgttttggacatggcatttgtttcgcagttgctctgtcttgggcaatgtcattgggcc
atctatgtggtgcttcatatgccacatcgtgaagattatccttatctgcaaactgctgtt
ataagggaaatcctcttccaatattgtgaagtttggagtactcaggaatcacaatgggag
ttcattgaaaatctaggcattccttcggcatggttgcatgaagctttggcaatatatttc
agttacattggtgacctctcaaaagctttggatcactttcttgaatgtggaaactggcag
agagcccactcgatattcatgatttcagttgctcattctctgtttttgtcaggaaaacat
tcagagatatggaggcttgcaacttcaatggaggactataagtcagaaattgaagattgg
gaccttggtgcgggaatttatatttcattttatttattaagaagttccatgcaggaagac
agcaacaccatgactgaactggacactcttgagaacaaaaatgatgcttgttcagacttt
attggttgcctaaacaagtctttggcagtttggagcagcaaattatcagttgatgcaaga
gtcgtgtactcaaagatggcagaagagatctgtagtctgcttctttccgacagcggtgaa
ggttcaacaggcgaggctcagctaaactgctttgacactgttttccgtgggcctatgccc
gaggacctccggtcataccatttgcaggatgctgtctcactttttacatgttatctttca
gagatagcacagtaa
DBGET
integrated database retrieval system
