Sesamum indicum (sesame): 105158532
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Entry
105158532 CDS
T04135
Name
(RefSeq) protein SPA1-RELATED 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105158532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105158532
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
105158532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Pkinase
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
PK_Tyr_Ser-Thr
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
105158532
NCBI-ProteinID:
XP_011073618
UniProt:
A0A6I9SSV7
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Position
LG1:complement(8298287..8305648)
Genome browser
AA seq
1064 aa
AA seq
DB search
MDEAIGDEVVELVDDRHIRNKENEFSLKPGSSSMLQSNEMITPGVNDYPENSKNGYSDIL
EAKDLDRIGSSEHASASPRCMNDAGVMVEELTLRNYDGERLTIVGTSSNRERVQAKRNQW
QNLYQIAGVSGIGNLHGPAGYKGKGQATSSAREDRSKNLFSGLLDQNDPPTNYNHNAVMD
NLLSNDDKGASGDILYSSGGIRTKILSKSGFSEYFIKSTLRGKGVIHKSQACRGSDTESG
DLDHSKSGIGGSTNSAALGLTAKSVSPISDGVSHPWNTVSTANGITLREWLEAGGKRANR
AEKMLIFRQVLNLVDISHSHGVSLQDLRPSCFKLLRSYQVMYLGSSVRSGLTQDVTDQDT
HQSNYNRYEKKPMYQSMLHLDNHAGKKRKLDDNMTFIQRWPQFPSRSGIRSAPINVVKVD
GADSLDPSNDAGYEHNPKTELKNQNKFFGRNVPNSSQTSQASVSCMLEEKWYTSPELFKE
KGCTFASNIYCLGVLLFELLGSFDSGRSLAAAMLDLRHRILPPSFLSENPKEAGFCLWLL
HPEPSLRPSTSEILQSEFISEVQELSGCELLPSINEEDEESELLLYFLTLLDEQKQKDAS
NLVEQIQCIEADIQEVEKRRKKKSMVLSSLPQESLTGSGSKSGRRSASLDMFPKMAPLSN
TETRLMSSIGQLENAYFSMRSNIKLSDSDFDTQRDGELLRSRENWSTMGMEDKSNSADRL
GGFFDGLCKYARYSKFKVRGILRNGEFSNSGNVICSLSFDRDEDYLAAGGVSKKIKIFEF
QALFNDSVDIHYPVVEMSNKSKLSCICWNSYIRNYLASTDYDGIVKLWDAATGQEFCHFI
EHSERAWSVDFSRVDPMKIASGSDDRLVKLWNINEKNSLCTIRNNANVCCVQFSAHSTHL
LSFSSADYKTYCYDLRNVSTPWCILAGHEKAVSYSKFLDAETLVSASTDNTLKVWDLKKT
SSNCLSRDACILTLRGHTNEKNFVGLSVADGYITCGSETNEVFAYYKSLPMPITTHKFGS
IDPITGKETEDDNGQFVSSVCWRQKSNMVVAANSSGCIKLLQMV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcaataggtgatgaggttgttgaacttgtggatgacagacacattagaaat
aaagagaatgagttctcgttgaaacctggcagctccagcatgctgcaatcgaatgaaatg
attacacctggtgttaatgattatcctgagaactcaaagaatggatattcagatattttg
gaggcaaaagacctagacagaataggttcttctgaacatgcaagtgccagtcctcgctgt
atgaatgatgctggagtcatggttgaggagttgactctgagaaattatgatggggaaagg
ttgactatagtgggtacttctagtaatagagaacgagtgcaagctaagcgaaaccagtgg
cagaatttgtatcagatagcgggtgtatcaggaatcggcaaccttcatggaccagccggg
tacaaaggaaaaggtcaggcaacctcaagtgccagggaggaccggagcaagaatttattt
tctggcttactagatcaaaatgacccaccaacaaactacaatcacaatgctgtcatggac
aatttattaagcaatgatgacaaaggtgcttcaggtgatatcttgtattcttctggaggt
atccggacaaaaattctatctaaatctgggttttcagagtacttcattaagagtacgttg
agaggcaaaggggtaatacataaaagccaagcttgcagaggatctgatactgagtctggg
gacctggatcattctaagtctggcattggtggttcgacaaattctgctgcactaggcttg
actgcaaagtctgtttcgcctatttcagatggtgtttctcatccatggaatactgttagt
actgctaatgggataactttaagagaatggctagaagcaggggggaagagggcaaataga
gctgaaaagatgcttatatttagacaggttctgaatcttgttgacatttcacattctcat
ggagtttcccttcaggacttgaggccctcctgcttcaagttgttgagatcataccaggtc
atgtatctaggatcttctgtacggtcagggttaacacaagatgttacagatcaagatact
caccaatcaaattataaccgatatgaaaagaagccaatgtatcaaagcatgcttcacttg
gacaaccacgctgggaagaagcggaaattagatgacaatatgacctttatccaaaggtgg
ccccaatttccatcaaggtctggcattagatctgcacccataaatgttgtcaaggtagat
ggtgctgactctctggatcctagcaatgatgcaggctacgagcacaatcctaaaacagaa
cttaagaaccagaacaagttctttggccgtaatgtgcctaactcatcacaaacatcccag
gcctctgtgagttgtatgctggaagagaagtggtataccagtcctgagctgttcaaggag
aagggctgtacctttgcgtcaaatatctactgcttgggggtccttctctttgagttactt
ggctcatttgattctggaagatctcttgctgctgcaatgcttgatttacgtcataggatt
cttccaccaagttttctttcagagaatcccaaggaagctggattttgcctttggttactt
catcctgaaccttcattacgcccaagcaccagtgaaattctgcagtctgaatttataagt
gaagttcaagaattatctgggtgtgagttgttgccatctataaatgaagaggatgaggaa
tcagaactgttgttgtatttccttactttactagatgagcaaaaacaaaaggatgcatcc
aatctagtggaacaaatccagtgcatagaagctgatattcaagaggttgagaaacggaga
aagaagaaatcaatggttctgtcttccttgcctcaggagtctctcactggaagtggaagc
aagtccggcagacgaagtgcaagtttagatatgtttcctaagatggcccctctaagtaat
acagaaacaaggttgatgagtagtatcgggcaacttgaaaatgcttacttttccatgaga
tccaacattaagctttcagacagtgattttgacactcagagggatggagaactgttgaga
agccgtgaaaactggtccaccatgggaatggaggacaagtccaattcggctgatcgttta
gggggcttctttgatggtttgtgcaaatatgctcgatacagcaaattcaaagtacgagga
attttacggaatggagaattcagcaattccggaaatgtcatatgctctttgagttttgac
agggatgaagactatttagctgcaggaggcgtgtcaaagaagataaaaattttcgaattt
caagctctctttaatgactctgttgacattcattatccagtcgttgagatgtcaaataaa
tcaaagctaagttgcatttgctggaatagctacatcagaaattacctagcatcgacggat
tatgatggcatagtcaagttatgggatgcagcaactggtcaagagttttgtcatttcatt
gagcatagtgagagggcttggtctgttgatttctctcgtgttgatccgatgaaaatagcc
agtggcagtgatgatcgtttggtgaagctttggaacatcaatgaaaaaaacagtttatgc
acgatcaggaacaatgcaaatgtttgctgtgtacagttctcagcccactccactcatttg
ttgtcttttagctctgctgattataagacctactgctatgatcttcgcaatgtttcaaca
ccttggtgcatattagctggccatgagaaagctgttagctactcgaaattcttggatgcg
gaaactcttgtttctgcatctactgacaacacactgaaagtttgggatctaaagaagaca
agttccaattgtttatcaagagatgcttgtatcttaactcttagagggcatacaaatgag
aagaactttgttggcttatcagttgctgatgggtatataacatgtggttcagagacaaac
gaggtatttgcctattacaagtctttgcccatgccaattactacccacaaatttggctcc
atcgatcccataactggtaaggagactgaagacgacaatggacagtttgtttcaagtgtt
tgctggagacagaaatcaaacatggtggttgctgccaattcatccgggtgtatcaaactt
ctgcagatggtttag
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integrated database retrieval system
