Sesamum indicum (sesame): 105158954
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Entry
105158954 CDS
T04135
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105158954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105158954
Spliceosome [BR:
sind03041
]
Common components
Common spliceosomal components
SR proteins
105158954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
105158954
NCBI-ProteinID:
XP_011074178
UniProt:
A0A6I9SVA4
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Position
LG3:complement(20402051..20405608)
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AA seq
255 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIHKGRIEEPVYRARGRSRSR
SPRPRDRDHRRRSRSRSRGRYERERHRGRDRDSRNRSRSRSRSRSRSGSPGYRRERGRGK
YDDERRRRSRSYGSASPARRSPSPRRSPTPNKSPPSRGESPDVRNHKDRSPTPKSVSPRG
RRDSRSPSPRSEAEE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagatctgggccgccggacatcagagacacctactccctcctcgtc
ctcaacattactttccgtacgacggcagacgacctctttcccctctttgataagtatgga
aaagtggttgatgtgtttatccccagagaccggaggactggagattccaggggctttgct
tttgtaaggtacaagtatcaagatgaggctcaaaaggctgttgaaaagctagatggaaga
gttgttgatgggagagaaataatggtacaattcgcaaaatatggccccaatgctgaacga
attcacaaagggagaattgaagaacctgtttaccgggccagaggaaggtcaagaagccgc
agtcctcgaccaagggacagggatcacaggaggagaagccgcagtagaagcagaggtaga
tatgaacgtgaacgtcatcgtggtagggacagggattctcgtaaccggagcaggagcagg
tctcgaagccgcagccgcagtgggagtcctggttatcgcagagaacgtggtagaggcaaa
tatgatgatgagcggcggagacgaagccggtcttatggaagtgcttctcctgctcgacga
agtcctagtcctcggagaagcccaactccaaacaaatcacctccttccaggggtgaaagt
ccagatgttcgtaatcacaaagatcggtcacctacccctaagagtgtctctcctcgcggc
cgtcgcgattctcggagtccatctccacgttctgaggctgaagaatga
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