Sesamum indicum (sesame): 105159012
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Entry
105159012 CDS
T04135
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105159012
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105159012
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
UnbV_ASPIC
Motif
Other DBs
NCBI-GeneID:
105159012
NCBI-ProteinID:
XP_011074245
UniProt:
A0A6I9SXF4
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Position
LG3:19131158..19133918
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AA seq
392 aa
AA seq
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MPKLATFSWAILLVLIAAVLSPAAAYNVVNFGARGDGRTDSTAAFLRAWKAACSSATPAA
VSVPRGTYLVRSIWFTGPCRSRILFEISGTIVAPNNYNDIGKSEFWILFYKVSRLTVVGG
TLDAKGSKFWSCRRGGNNHCPVGARSIAFQTCSNVVVSGLTSLNSQTIHIGINECSNIKI
QNVKIIAPSGSPNTDGIHIASSRGITITSSTIRTGDDCVSVGPGSMNVYMEKIGCGPGHG
ISVGSLGNSFNEEGVQNVTVINSVFTKTDNGVRVKSWARPSGGYAKNLNFKNLIMRNVAN
PIIIDQKYCPDYRCPHQSSGVRVSQVTYKNIKGTSSTQAAMTFRCSSSNPCSGIKLQDIK
LTYVNTLRRPTVSYCENARGSSSGSVFPRSCW
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagttggcaacattttcttgggcaatcttgcttgtcctgattgccgcagtgtta
tctcctgctgcagcctacaatgttgtcaacttcggtgcacgaggggacgggaggaccgac
tcgactgcagcctttctccgtgcgtggaaggcagcgtgcagctccgctacaccggctgca
gtatcggtccctaggggcacgtacttggtgagatcgatatggtttacgggcccgtgcagg
agccgtatcctgtttgaaataagtggaaccattgtcgccccgaataactataatgatatc
ggcaaatctgagttttggatattgttctataaagtcagcaggttaacagttgttgggggg
acattggatgctaaaggttccaagttctggtcttgtcgacggggcggaaacaatcactgc
cctgtcggggcgaggtcgatagcattccaaacgtgcagcaatgttgtcgttagtggtttg
acatcgttgaacagccagacaattcacattggcattaacgagtgcagcaacatcaagata
cagaatgtgaagatcattgcaccgagtgggagccccaacacggacggcatccacattgca
tcctcccgcggtatcacaatcaccagcagcacgattaggaccggagacgactgtgtatct
gtcggccctggatcgatgaacgtgtatatggagaaaatcggatgtggccctggacatggc
atcagcgttgggagtctgggcaatagtttcaatgaagagggagtgcagaacgtgacggta
ataaattctgtcttcacaaagacagacaacggcgtccgtgtgaaatcgtgggcgaggcca
agcggtggctatgcgaagaatctcaacttcaagaatctcatcatgaggaatgttgccaac
cccataatcatagatcaaaagtattgccctgattacagatgccctcatcagagctctgga
gtgagagtgagtcaagtgacatataaaaacataaaggggacgtcgtcgacacaggctgcc
atgacgttccggtgcagttcgagcaatccatgcagtgggatcaaactgcaagatatcaag
ctgacttatgtgaatactttgagaaggccaacagtttcatactgtgaaaatgcaagagga
tccagcagtggttctgtgtttccaagaagttgctggtag
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