Sesamum indicum (sesame): 105159045
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Entry
105159045 CDS
T04135
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105159045
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105159045
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
BsuPI
Motif
Other DBs
NCBI-GeneID:
105159045
NCBI-ProteinID:
XP_011074280
UniProt:
A0A6I9SUE4
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Position
LG3:complement(20918971..20926063)
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AA seq
635 aa
AA seq
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MPSTRLRLQVRDHHVVMDNGVLRVTISKPDGIVTGIKYNHIDNLLEIANDESNRGYWDLV
WSQPGSTGTAGTFEVIHGTNFKVVTENEEQVELSFSTTWNASLQGKLAPLNIDKRFVMLR
GSSGFYTYAIYEHLEGWPGFNLDETRIVFKLRKDKFHYMAVADNRQRYMPLPDDRLPGRG
QPLDYPEAVLLVNPVEPEFTGEVDDKYQYSCENKDVKVHGWICTDIPAVGFWQIMPSNEF
QTGGPSKQDLTSHVGPTTLAMFVSAHYGGEDVVLKFEEGEAWKKVFGPIFMYLNSVTNGS
DPFLLWEDAKEQATEQVVRWPYSFPASEDFPTSAERGNVSGRLLVRDRCVSDEEMVGNGA
YIGLAPPGEIGSWQTQGKGYQFWRKADEKGYFTINNIRTGDYNLYAWVPGFIGDYKLEEV
ISITPGCNIDMGELVYEPPRDGPTLWEIGIPDRSAREFYIPDPDARYINKLYVNHPDRFR
QYGLWERYSELYPKGDLVYTVGESNYSTDWFFAQVTRKKDDNTYQATTWQIRFRLATIKP
TGTYKLRLALASAAQAELQVRINNPDQDPALFTSGLIGKDNAIARHGIHGLYWLFNVELP
AASLVEGDNTIYLTQANTTSPFQGIMYDYIRLESP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaacaagattaaggttgcaggttcgagatcaccatgtggttatggacaatgga
gttcttagagtcacaatatcaaagccagatggaatagtgaccggcataaaatacaatcac
attgacaatttgctagagatcgccaacgatgaatctaatagagggtattgggatcttgtt
tggagtcagccaggaagtactggaactgctggaacatttgaagtgatccatgggacgaat
tttaaggttgtcacagaaaatgaggaacaagtagagctatcattctcaacaacatggaat
gcttccctccagggcaagcttgctccattaaacatagacaaaaggttcgtaatgcttcgt
ggatcttcaggcttctatacctacgccatttacgaacatttggaggggtggcctggtttc
aaccttgatgaaaccagaattgtgttcaagctcagaaaggacaagtttcactatatggct
gtggcagacaacaggcaaaggtatatgcccttaccagatgacaggttgcctgggagagga
cagccattggactatcctgaagctgtcctccttgtaaatcctgtggagcctgaattcaca
ggagaggtggacgacaaataccaatactcatgcgaaaacaaagacgtgaaggtccacgga
tggatatgcacggatattccagccgtgggcttctggcagatcatgcccagcaatgaattc
cagacaggaggaccttcgaaacaagatcttacgtctcatgttggtccgaccactcttgct
atgtttgtgagtgcacattatggaggggaggatgtagttctgaaatttgaagaaggtgag
gcatggaagaaagtctttggtcccatttttatgtatcttaattctgtcaccaacggatct
gacccctttttgctttgggaagatgccaaagaacaggcgacggaacaagttgtgaggtgg
ccttatagttttccagcatcagaagattttccaacatcagcggaaaggggcaatgttagt
ggcagattattagtcagagacaggtgtgtgagtgatgaggagatggtgggaaatggagca
tacattgggttggctccaccaggagaaattggatcttggcaaacacaaggcaaggggtat
caattttggagaaaagcagacgaaaaaggatattttaccatcaacaacatccgtactgga
gactacaatctttacgcatgggtccctggttttatcggagattacaaacttgaagaagtc
attagcataaccccaggatgcaacatcgatatgggtgagcttgtgtatgagccccccagg
gatggaccaaccctatgggaaatagggatccctgatcgttcagcccgagaattttacatt
cccgatcccgatgcgagatatatcaataaattatatgtcaatcatcccgacaggttcagg
caatatggactgtgggagagatacagtgaattatatcccaagggtgacttagtctacaca
gttggggagagcaattacagtacggactggttctttgcccaagttaccagaaagaaagac
gacaatacataccaagcaactacgtggcaaatcaggttcagactcgccaccataaaacca
accggaacgtacaaattgagactggcgcttgcatctgcagcgcaagctgagttgcaggtt
cgaataaataatccagatcaagatcccgcattatttacgagcggattaattgggaaagac
aacgcaatcgcacgacatgggattcatgggctctattggttgttcaatgtggagttaccg
gctgcttcgcttgttgaaggcgacaacacaatttatttgacgcaagcaaatactacgagt
ccatttcaggggattatgtatgattacattcgtctcgaaagcccttga
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