Sesamum indicum (sesame): 105159059 Help Entry 105159059         CDS       T04135                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism sind  Sesamum indicum (sesame) Pathway sind03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:sind00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     105159059  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sind03021]     105159059    03019 Messenger RNA biogenesis [BR:sind03019]     105159059 Transcription machinery [BR:sind03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      105159059 Messenger RNA biogenesis [BR:sind03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      105159059     U7-dependent histone pre-mRNA processing factors      105159059 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N CRM1_C Motif Other DBs NCBI-GeneID:  105159059 NCBI-ProteinID:  XP_011074295 UniProt:  A0A6I9SUT5 LinkDB All DBs Position LG3:21097399..21124082 Genome browser AA seq 1341 aa AA seqDB search MAGVQPREQALPLLAAANNHGDLAVKLSSLKQAKDILLSVEPSQAAELFPYLVELQSSPE TLVRKYLLEVIDEIGARTREHLSILLPVLLTFLKDNNPVIAKQSIVTGTKFFCIVLEELA FQFQRRGIVERWLEELWTWMIKFRDAVLGIIFEVGSVGPKLLAIKFLERYVLYFTLDSND FGTCSPEVMIRQGRVFNISWIMDGHPLLDPPALVADANRFLGVLLDMLRSASNFPGSLTI AVVNSIAAIARKRPIYYKSVLSALLDFAPSFEVAKARHTVSIQYSLRTAFLGFLRCTHPV IAESRDRLIRELRAMNAGDAADQVIRQMDKIMKNNERASRDLQVSKDDQLSNQLHVSGDV TKKRLAPVDNEDLNNSFDATSKRLRYGLHNNIPATVDFTDARQDNVNGISPKLPVSDGDL TPEEQMIAMIGALIAEGERGLESLEILISNIHPDLLADIVITNMKHLPNNPPPLTRYSNL SLNRPSDSSSDPSQVVASNGFPTIQALEVSAQVHASSSNTTSLPFLDMSTSTSPSTDSKR DPRRDPRRLDPRRMVVPVDAPPSSVVEDNANPVQYLAALSDNDASSLSNPPVLLPPPSIS ESTSGLVMPSTETNLNLLESPVISEGNQSIPKFEVQDVEDNEFTPDRETSNGVQRLSSPI SKVEDSVVQASIDVAVLDEAYSPSSSEAEQLSPDRSNFEASEIASTEFPVLPLYIGLAED HQRNARRLALERIINSYQNSHRTDLKQTQIALVARLFAQTDVNDVIGMVQQRIVSDYEQQ KGHELVMYILYHLHSLVISDPASSVAVVYEKFLLGVAKSLLGDLPASDKSFSRLLGEVPC IPDSVLGLLGDICTRSQSGSDGRDGDRVTQGLGAVWSLILGRPGSRKACLDIALKCTIHP KDDVRAKAIRLVSNKLYAISYLSESIEQFATDMFLSAIDQRFSDSVVSQSAESEKRVGGQ VESAETSISGSQVSDPEISQNDTKGVQNASLDDTSIPSLQAYSLMSLFFALCTKKPTLLQ LVFDSYGRAQKAVKQAVHRHISVLMRAMGSSFSQLLSIISNPPHGSEDLLTQVLHALCEG ITPPPDLVVTVKGLYETRLKDATILIPIISAFSKDEVLPIFPRLVQLPLNKFQMALAHIL QGSAHTGPALTPAEVLVAIHDISPEKDGLPLKKITDACSACFEQRTVFTQQVLTKALNQM VDRTPLPLLYMRTVIQAIDAFPTLVDFVMEILSKLVNRQIWRMPKLWVGFLKCISQTQPH SFRVLLQLPPPQLESALNKYPNLRGPLTAFVNQSSVQTSLPRSTLVLLGLAPPEEHMQHP HVTSSLHASDPSSSVRGATFT NT seq 4026 nt NT seq  +upstreamnt  +downstreamnt atggctggcgtccagccgagggagcaggcgctcccactactagcggcggcgaacaaccat ggagatttggccgtgaagttgtcgtcattgaagcaggctaaggacatcttgttgtccgtt gaaccgtcccaggcggcggagctttttccttacttggtcgagctccagtcctcccctgaa accctcgtcagaaagtacctccttgaggtaattgacgagatcggggccagaacaagggaa catctgtccattttactgcctgtcttattgacatttttgaaagataataatcctgtgatt gcaaagcaatctatagtcactggcacaaaatttttttgtattgtgttggaggagttggca tttcagtttcaacggcgtggtatagttgagagatggcttgaagagctgtggacatggatg atcaaatttagggatgctgtattgggcattatctttgaggttggttctgttggtccaaag ttgttagcaataaaatttctggaaagatatgttttatacttcacgttggattcaaatgat ttcggaacatgcagcccagaggtaatgataaggcaaggaagggtttttaatatctcgtgg ataatggatggtcatcctctgttggatccacctgctcttgtggcagatgcaaacagattt ctaggcgttttattggatatgttgcggtcagctagtaatttccctggttccttgactata gctgttgtgaatagtattgcagcgatagcacggaagaggcccatctactataaatctgta ctttctgcactgcttgattttgctccaagttttgaggtagcaaaggctcgccatactgtc agcattcagtattctttgagaactgcatttctaggatttctgaggtgtactcatcctgtc attgcagagtcaagagatagattgattagagagttgcgtgcaatgaatgctggagatgct gctgatcaagttatccgacagatggataaaatcatgaaaaacaatgagcgtgcttcaagg gatctgcaagtgagtaaggatgatcagctatccaatcagttgcatgtttcaggggacgtg acaaagaaaagattggcgccagtggacaatgaagatctaaacaatagctttgatgccact tctaagagactccgttatggccttcataacaatatacctgccactgttgattttactgat gccaggcaggataatgtgaatgggatttcccctaaacttcctgtatcagatggagatcta actccggaggaacagatgattgctatgattggtgctttaattgcagaaggggaaagagga cttgaatctcttgagattcttatatctaacatacatcctgatttacttgctgacattgtc ataacgaatatgaagcacttgccaaacaatccacctcctttgaccagatacagtaacttg tctctgaatcgtcctagtgattcttctagtgatccatcccaggtagttgcgtcaaatggc tttccaactattcaggcattggaagtttcagctcaagtacatgcatcttcatcaaacaca actagtttgccatttttggatatgtccacttccactagtccctccacagattccaaacgt gatccgcggagggatccgcgtcgccttgatccaaggcgcatggtagttccagttgatgca ccaccatcatctgttgtggaagataatgctaatcccgttcaatatctagctgccctatct gacaatgatgcttctagcttgtccaatccccctgtattgctgcctccaccatctatttct gaaagtacttctggccttgtgatgccctcaactgaaaccaatttaaatctattggaatct cctgtaatatcagaaggtaaccagtcaattccgaaatttgaagtccaggatgtggaagac aatgaattcaccccagacagggaaacaagtaatggtgtacaacgtttgtcgtcccctatt agcaaagtcgaagactctgttgtgcaagcatcaatagatgttgctgtgctcgatgaagca tattccccatcatcatcagaagcagaacaactttcaccagataggtcaaattttgaagca tctgagattgcatccacagagttcccggtccttccgctgtacattgggctggctgaagac catcaaagaaatgcaaggagactggcacttgaacggataattaattcgtatcaaaattcc catagaacagatttgaaacaaacacaaattgcattggttgcccgattgtttgcacagact gatgttaatgatgtgattggaatggtgcaacaacgtattgtatcagattatgaacagcaa aaggggcatgagcttgtaatgtatatcctttaccatctgcacagtcttgtcatctcagat cctgcgtcttctgttgccgttgtatatgagaagttccttcttggagtggcaaaatctttg ctaggcgatttgccagcatctgacaagtcttttagtcgacttcttggtgaagttccttgt atacctgattctgtgttggggctgctgggtgatatatgcaccagaagtcagtcgggatca gatggtcgtgatggtgatcgtgtcactcaaggtcttggtgcggtgtggagcttaattttg gggcggccaggcagtcggaaagcatgtttggatatagccttgaagtgtacaattcaccca aaggatgatgttcgggcaaaagctatacgtctggtgtccaacaaactatatgcaattagc tacctttctgagagcattgagcagtttgcaacagatatgttcttgtcagccatagatcag cggttttcagattcagtagtttcgcaatctgcagagtctgagaaaagagttgggggacag gtggaaagtgctgaaacatccataagtggttctcaagtttcagatcctgaaatatctcaa aatgacactaagggtgtccagaatgcatccctggatgatacatcaattccttctctccaa gcttacagcctcatgtctttgtttttcgcattatgcacaaagaaaccaactcttctgcaa ctggttttcgacagttatgggcgtgcccagaaggctgttaagcaggctgtgcatcgtcat atatctgtccttatgagggcgatggggtcatcattctctcaactgctcagtataatatct aatccaccccatggaagtgaagatttattgactcaggttcttcatgcattatgtgaaggg ataacaccacctccagatctagtggtgactgtcaaaggtttatatgagaccagactaaag gatgctactattcttataccaattatatctgctttttccaaagatgaggttttacctatt ttccctcggcttgtccagcttccattgaataagtttcagatggcacttgctcatatttta cagggttctgctcacacaggtcctgcattaacccctgctgaagtgttggtagcaatccat gacatttctcctgagaaagacgggcttccactcaaaaagatcacggatgcctgctcagct tgttttgagcagcgcacagtttttacgcaacaagtccttacaaaagccttgaatcagatg gttgatcggactccacttccgctcctttatatgagaacagtaattcaagcaattgatgca tttccaacactggttgattttgtcatggaaattctgtccaaacttgtgaacaggcagata tggagaatgccaaaactatgggttggcttcttgaaatgcatctcccaaacacagccacat tccttccgtgtattgttacagttgccgccacctcagcttgaaagtgctctgaacaaatat cctaatcttcgtggtcctcttactgccttcgtgaatcagtctagtgttcaaacttcttta cctaggtcaacgctagtgcttcttggccttgccccaccagaagaacatatgcagcacccg cacgtcacttcatctttgcatgcgtcagatccaagttcttcagttcgcggggcaacattt acatga

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