Sesamum indicum (sesame): 105159118
Help
Entry
105159118 CDS
T04135
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105159118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105159118
03036 Chromosome and associated proteins [BR:
sind03036
]
105159118
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105159118
Coactivators
SAGA/TFTC/STAGA complex
105159118
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105159118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Wyosine_form
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
105159118
NCBI-ProteinID:
XP_011074371
UniProt:
A0A6I9SXR4
LinkDB
All DBs
Position
LG3:21706474..21713485
Genome browser
AA seq
976 aa
AA seq
DB search
MDPNIVKFLEEDEDETMHSGADVDAFTAELNRDIERNDSTQQQPSDSDNAALSQGNSQTA
SQFLPQWQSLSHDGTVNFGSGQDLMVTEEKEQHLSQLEPHQHGLDSENRKENDSLSHEFN
PLPDNPLSDAGAQPQDDRNTFPVSQPIGSLTSGEQSIHIQEPVREPNPDSQMHTLQNISS
RPSVAMGSNDQLPMSMEPNDQQSMSTGKANQPTTSMGISNEQQVMSTVNQHTTGMSSHQA
SASGMSNQQPMTSSNQQPGTALKLNKQVPFGMLLPIIQPQLDKDRAMQLHTLYFKLKKNE
ISKDGFVRHMRSIVGDQMLKMAVYKLQTQAARNSQTAPNQFQSQPQASARQMQVPSAQMP
IDLSNSTGDTNTAKPREVESQADSQGVQVSQMSTSSSGVLSQERKHPAFPTQGLNKQQHM
HFSQTSFPTYGSAGSSYSPFSATNAASSTSLRPQPHDSQMKQAPPHQNMTVSHVGPSTQA
MNMMNMPKFDRPHSFGDPKKMQGGSLTHVNSNTALQQNQVQWPSSTSKEPKIGVSSSMTH
VKQEPLDQEQQHKGLSSLSSTPAKQGPASGNLKDESFEIQSSRTGFTPPTSLVPSNSVSS
SIPSAMETNILSNSRMPSLTSPIGTGNNSKAPLKKPLVGQKKPMEAPGSSPPSSKKQKVS
GAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRVVQEEEERLILQKIP
LQKKVVEIMAKCGLKNMSNDVERCLSLCVEERMRGLISNLIRLSKQRVDIEKPRHRTIIT
SDVRQQIMTINRKAREEWEKKQAETEKSQKLNDPESTTGVDGDKEKDESRAKSTKANKEE
DDKMRTTAANVAVRAATGVGDMLSRWQLMIEAKQKQGGSDTASGSQAGKDVARKPSATSS
KNTRENQEAEKRDTSAAFATPASVRKVGRNQVVIPRVTRSISVKDVISILEREPHMSKST
LLYRLYNKDNADAVAE
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaatattgtgaaattccttgaagaagatgaggacgaaacaatgcattctggg
gctgacgtggacgctttcacagcggaattgaacagagacattgagaggaatgattccacg
cagcagcagccctctgattccgataacgcagccttatctcagggaaacagtcaaaccgca
agtcagtttcttccccagtggcagagtctgagccatgatggaactgttaattttggaagt
ggacaagatctcatggttacagaggaaaaggagcagcatttgtctcaattggagccgcat
caacatgggttggactccgagaatagaaaagagaatgactcactgtcccacgaatttaac
cctttaccggataacccattgagtgatgctggcgcacaaccgcaagatgaccggaacact
ttccctgtatcccaacctatcggttcgctaacatctggagaacaatcaatccatatccaa
gagccagtgcgtgaaccaaatcctgattcacagatgcacacattacaaaatatcagtagt
cgtccatctgtggctatggggtcaaatgatcagctgcctatgtcaatggagccaaacgat
caacagtctatgtcaacaggaaaagcaaatcaaccaacaacaagtatgggaatcagtaat
gaacaacaggttatgtcaactgtgaatcaacatactacaggaatgagtagccaccaagcg
tctgcgtcggggatgagtaatcaacagccgatgacgagtagtaatcaacagccaggtacc
gccttgaagttgaacaaacaagtgccctttggcatgttgcttcctatcatacaaccccaa
cttgacaaggacagagctatgcaacttcacactctttactttaaattgaagaaaaatgag
atctctaaagatggttttgtccgacacatgagaagcattgtcggggaccaaatgttaaaa
atggctgtatacaaactgcagactcaggctgctaggaactcacagactgcccccaatcaa
tttcagtcacagcctcaggcctctgctcgacaaatgcaagtgccttcagcacaaatgcca
atagatttgagcaattcaacaggtgatactaatacagcaaaaccacgtgaggtggaaagc
caagcagattcgcaaggtgtgcaagtaagccaaatgtctacttccagttctggtgtttta
agtcaggagaggaagcatcctgcatttccaacacagggacttaataagcagcagcatatg
catttctcacagacatcttttcccacatatggaagtgctgggagtagttattcacctttc
tctgcgactaatgctgcatcttcaacatctctccggccgcaacctcatgattctcagatg
aagcaggctccacctcatcagaacatgactgttagtcatgtgggaccttcaacccaggcc
atgaatatgatgaacatgcctaagtttgataggcctcattcttttggcgatcctaagaaa
atgcaggggggaagtctgactcatgtgaacagcaacactgccctgcaacagaatcaggtg
cagtggccatcgtccaccagcaaagaaccaaaaattggtgtttcatcatcaatgactcat
gtaaagcaggaaccactcgatcaagaacaacagcataaagggttatcttctttgtcttcc
acgccggcgaaacagggtcctgcttcagggaatctgaaggatgaatctttcgaaatacaa
tcgtctagaacgggattcacaccacctacaagccttgtgccctcaaattcagtttcctct
tccattccaagcgcgatggagaccaacattctgtcaaattctcgaatgccttctctgacc
tctcccattgggactggaaataattccaaggctcccctaaaaaagcctttggtcggccag
aagaagccaatggaagcacctggttcttctcctccatccagtaagaaacaaaaagtgtct
ggggcctttctcgatcagagcattgaacaactgaatgatgttactgcagtgagcggagtt
aatctcagggaggaggaggaacaactcttttcaggctccaaggaagacagccgggtttca
gaggcttctcgacgagttgttcaagaagaagaagaaaggctgattttgcaaaagattcca
cttcagaagaaagttgtggaaataatggcaaaatgtggtttaaagaatatgagcaacgac
gtggagagatgcttgtccttgtgcgtggaagagagaatgcgtggactcatatctaatctc
atcagactttcaaaacagcgggtagatatagagaagccaaggcacaggaccatcatcacc
tcagatgttaggcaacagatcatgacaataaaccgtaaagctcgtgaagaatgggagaaa
aagcaggctgaaactgaaaagtcacagaaactgaatgaccctgagagtactactggagtt
gatggtgacaaggagaaggatgaaagtcgtgcaaaatcaacaaaggctaacaaggaagaa
gatgacaagatgcgcacaacagctgcaaatgttgcagtccgagctgcgactggagttggt
gacatgctgtcaagatggcagttaatgattgaggcgaagcagaaacaaggaggatcggat
acagcatctggttctcaggctggtaaagatgtggcacgaaagccttcagcaacctcttca
aaaaatacaagggaaaatcaagaagcagaaaagcgggatacttcagctgcttttgccacc
cctgcatcagttagaaaagtaggaagaaatcaagttgtcataccacgggtgacccgcagc
atctcagttaaggatgtgatttccatattagaaagggagcctcatatgtcgaagtccaca
ctgctataccgcttgtataacaaggacaatgccgatgctgttgctgagtga
DBGET
integrated database retrieval system
