Sesamum indicum (sesame): 105159316
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Entry
105159316 CDS
T04135
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105159316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105159316
Membrane trafficking [BR:
sind04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105159316
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105159316
Exosomal proteins of bladder cancer cells
105159316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
105159316
NCBI-ProteinID:
XP_011074632
UniProt:
A0A6I9T2Z2
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All DBs
Position
LG3:complement(23426488..23432620)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSVFYVKDRFLRVFEYSTQKDTQLIPIRRPG
SSSLNQGPRTLSYSPTENAVLVCSDTDGGSYELYVIPRDSYGRGDMVQESKRGVGAAAVF
VARNRFAVLEKSSNHVLVKNLKNEILKKSLLPIATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRVVLGDLQTSFVRYAVWSQDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYVTKIYGNTIFCLDRDGKNRPIIIDSTEYI
FKLSLLRKRYDQVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGNI
EKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLEKLSK
MMKIAEVKNDVMGQFHDALYLGDVRERVKILENAGHLPLAYITAAIHGLHDIAERLAADL
GDNVPSVPAGKKASLLIPPSPVLCAGDWPLLMVSKGIFEGGLDDTGRGETEDYEEAADAD
WGEALDIGEVDNLQNGDISLVLEDEVVHEENDEEGGWDLEDLDLPPDAETPKTAAIGRSG
VFVAPTPGMPVSQIWVQKSSLAAEHAAAGNFETAMRLLSRQLGIRNFTPLKSQFIDLHLG
SHSYLRAFTSAPLISVAVERGWNESASPNVRSPPALVFNFSQLEEKLKAGYKATTAGKFS
EALRQFLSILHTIPLIVVETRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQQVL
AAYFTHCNLQLPHLRLALLNAMTVCFKAQNLSTAANFARRLLETNPSNENQARTARQVLQ
AAEKNMKDATQLNYDFRNPFVVCGATYVPIYRGQKDITCPYCSTHFVPSQQGQLCTVCEL
AGIGADASGLLCSPSQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacaaagagcaatagagttaaaggtttgagcttccacagcaag
aggccatggatcttggcgagtctccacagcggagtgatccagctctgggattatcgcatg
ggcaccctcattgatcgattcgacgagcacgatggacccgttcgtggtgttcattttcac
aagtcgcagccgcttttcgtttccggaggtgatgattacaaaatcaaggtgtggaattat
aaattgcacagatgtctatttactcttcttggccatcttgattatatccggacagttcaa
tttcatcacgagtatccgtggatagtaagtgcaagtgatgatcagacaattagaatatgg
aattggcaatcacggacttgcatttctgtgttaacggggcataaccactatgtcatgtgt
gcctcatttcaccccaaagaggacttggtcgtttcagcctctttggatcagactgttcgt
gtttgggatataggtgccttgaggaagaaaacagtatctcctgctgatgacattctgcga
ttgtctcaaatgaatacggacttctttggtggggttgatgctgttgtgaagtatgtcttg
gaaggccatgatcgaggggttaactgggcttctttccatccaactctccctctgattgtt
tctggagcagatgatcgccaagtgaaaatctggcgcatgaacgatactaaggcttgggag
gtggacacattgaggggccatatgaacaatgtttcttgtgtactgttccatgcaaggcag
gacattattgtatcaaattcagaagataagagtatccgggtttgggatgctactaaacga
actggcttgcagacgttccgtagagagcatgataggttctggattcttgcagcccatcct
gagatgaatcttctggcggctggtcatgacagtggcatgattgtttttaagttggagaga
gaacgtcctgccttttctgtcagtggtgattcagtcttctatgtcaaggaccgctttcta
cgtgtttttgagtattcaactcagaaagatactcagctgataccaatccgtcgtccaggg
tccagtagtttgaatcaaggccctcgaactctttcttacagtcctactgaaaatgctgtt
ttggtttgctctgacacagatgggggttcatatgaactctatgtcatccccagagatagt
tatggcagaggcgacatggttcaagagtcaaaaagaggtgttggggcagcggcagttttt
gtggctcgaaataggtttgctgtgcttgagaagagcagcaatcatgtcctggtcaagaac
ctgaagaatgagatacttaaaaagagtcttctgcccattgccactgatgctatattctat
gctggtactggaaatctgctctgcagggctgaggacagggttgtcatctttgatctccaa
caaagggttgttcttggggatcttcaaacgtcttttgttaggtatgcggtatggtctcag
gatatggagagtgttgctttactaagcaagcattcaattgtaattgctgacaagaagctc
gtgcaccgctgcactcttcacgagacaattcgcgtgaagagcggagcatgggatgataat
ggtgttttcatctatactacactgacgcacattaagtattgccttcctaatggggatagt
ggaattatcaagacactggatgtcccagtatatgttacaaaaatatatgggaacacgatc
ttttgcttggaccgagatgggaaaaaccgtcctatcatcattgattcgacagagtatata
tttaagctatccctgctgaggaagagatatgatcaggttatgagcatgataaaaaattca
gaactttgtggacaggccatgattgcttacctacagcagaagggctttccacaagttgct
ctttatttcgtgaaggatgagagaactcgcttcaacttagcccttgaaagtggtaacatt
gagaaagcccttgaatctgctaaaaagatagatgagaaagattactggtataggctaggc
gtggaggcccttcggcagggaaatgcagggattgttgaatatgcataccaaaaaacaaag
aactttgagagattatcttttcattatctgataactggtaatctagagaaattgtcgaaa
atgatgaaaattgctgaggtaaaaaatgatgtgatgggccagtttcatgatgcactatat
cttggtgatgtacgggagcgtgttaagattctggagaatgcaggtcatctgcccctggct
tatataacagctgcaatccatgggctccatgatatagctgagcgtttagctgcagatttg
ggggataatgttccttctgtgcctgcagggaagaaagcttctcttctaatacccccgagt
ccagtgctatgtgctggagattggcctttgttaatggtcagtaaaggcatatttgagggt
ggcctggatgatacaggcagaggagaaaccgaagactatgaagaggctgcagatgctgat
tggggtgaggcactggatattggtgaggtggacaacttgcagaatggagacatcagtctg
gtgctagaggacgaggttgtgcacgaggagaatgatgaggagggtggatgggatcttgag
gatctggatctgcctcctgatgctgagacaccaaaaacagctgcaattggacgttctggt
gtttttgtggcccccacacctggtatgcctgtaagccagatttgggtccagaaatcgtct
cttgctgctgaacacgcagctgctggaaactttgaaacagcaatgcgtttattgagccgt
cagttaggcatacgtaatttcacccctttgaagtcgcagtttattgatcttcacttgggc
agtcacagttatttacgtgcctttacttcagcgccgttgatctcagttgcagttgagagg
ggttggaatgagtcagcaagtcccaatgtgcgaagcccccctgctctagtgttcaatttc
tcccaattggaagagaagctcaaggctggctacaaagctacaactgctggaaagttttct
gaggctcttcgacagttcctgtctattcttcacacaattccgctgattgttgttgaaaca
cgaagagaggtggatgaagtcaaggaattgattatcattgtcaaagaatatgttcttggt
ttgcagatggagcttaagaggagggaactgaaggacaacccagtccgtcagcaggtactt
gctgcctatttcacccattgtaacctccagcttccgcacttgaggcttgcactactgaat
gctatgaccgtctgcttcaaggcacaaaatctgagcactgcagccaactttgccaggcga
cttctggagaccaatcctagtaatgagaatcaagccagaaccgctcgccaagttctgcag
gctgccgagaagaatatgaaagatgctacacagcttaactatgacttcagaaatcctttc
gttgtgtgtggggctacatacgtgccaatttaccgggggcagaaagatataacttgcccc
tactgcagtactcattttgttccatctcagcaaggccagctatgtactgtttgtgaactt
gctgggataggagctgatgcatccggtttgctctgttctccttcacagatacgatga
DBGET
integrated database retrieval system
