Sesamum indicum (sesame): 105159429
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Entry
105159429 CDS
T04135
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105159429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105159429
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105159429
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
105159429
NCBI-ProteinID:
XP_011074794
UniProt:
A0A6I9SW00
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Position
LG3:complement(24149259..24151810)
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AA seq
380 aa
AA seq
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MIGTKGLDLCFEKMMVFGGVENMMNGSNNNNLGSEIGGGLGGGLRIIEWKDIPVELLLRI
LSLVDDRWVIVASGVCHGWRDAISWGLTHLSLSWCKKRMNDLVLSLAPKFTKLEVLILRQ
GTPQLQDDAVEKIANHCHDLQELDLSKSFRLTDRSLYALAHGCPNLVRLNISGCSAFSDT
ALAFLTGFCRKLKFLNLCGCVRAASDRALKAIGYNCNELQSLNLGWCDRVGDEGVKSLAY
GCPDLRALDLCGCVLITDDSVIALANNCLHLRSLDLYYCQNITDQAMYSLAQSRVKNKPG
TWASVSNRHEEEGLTNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSV
HCACAVQAHHAPTVIPHLAH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatagggacaaagggcctggacttgtgttttgagaagatgatggtttttggtggtgtt
gagaatatgatgaatggtagtaataataacaatcttggtagtgaaattgggggtggttta
ggtggagggttgaggataattgagtggaaagatattccagtggagctgttgctgaggatt
ctgtctcttgtggatgatcggtgggtgattgtggcatctggggtgtgtcatggctggagg
gatgccatttcttggggcctcactcatctctccctctcctggtgcaagaaacgcatgaac
gatttggttctgtcactggctcccaaattcacgaaactggaggttctaattctgcgacaa
ggcacaccgcaacttcaggatgatgctgttgaaaaaattgcaaatcactgtcatgacctg
caagagttggatctcagcaagagtttcagacttactgaccgctccttgtatgccttagca
catggttgtccaaatcttgttaggctgaatatcagtggctgttcagccttcagcgatact
gctctcgctttcttaactggcttttgcagaaaattgaaattcttgaatctttgtggatgt
gttagggctgcatcggatagggcgctaaaggcgattggatacaactgtaacgaattgcag
tctttgaacctgggatggtgtgaccgggtcggtgatgaaggggtgaaaagcttagcctat
ggttgccctgatctcagagctcttgatttgtgtggatgtgttcttataaccgatgacagt
gtaattgcactggcaaacaactgccttcacctgaggtccctggacctatactactgccag
aacattacagatcaagccatgtattctctggcacaaagccgagtgaagaacaagcctggg
acatgggcgtcagtttccaaccggcatgaggaggaagggcttacgaatctcaacatcagc
cagtgcactgccctgactccaccagcggtacaggcggtatgtgactcgtttcctgctctt
catacgtgtcctggtcgacattccttgataatcagtggttgtctcagcttaacatctgtg
cattgtgcttgtgctgtccaagcacaccatgcaccgactgtgatccctcacttagctcac
taa
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