Sesamum indicum (sesame): 105159725
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Entry
105159725 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105159725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105159725
03032 DNA replication proteins [BR:
sind03032
]
105159725
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
105159725
Prokaryotic type
105159725
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
105159725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
105159725
NCBI-ProteinID:
XP_011075203
UniProt:
A0A6I9SWZ2
LinkDB
All DBs
Position
LG4:complement(782163..784341)
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AA seq
602 aa
AA seq
DB search
MADVQLSHSEKTKKKKSKSKEEDDNDAVDFLIKPQSYTPAIDTSQWPILLKNYDKLNVRT
GHYTPLPSGYSPLKRPLAEYIKYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDP
KVTGNLIVCIDRATRLVKSQQGAGMGXXXVCVARLHSKVPEVAKVARALETLTGAVFQRP
PLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHMQ
ELRRVRSGILGEKDNMVTMHDVLDGQWVYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDS
AVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGTVA
KIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKPNENTPAEWSRNVVLPTGGDS
VVASLAAAAEPQPSSGGNVEGAVVEVDKKKKKKHKDKEDDGEEGRKRKLDALDGSPVPDA
VVKKAKVDAAEDLQVKEKAENVEVEPEKKEKKKKKKKESADEAMASDGEKSKKDKKKDKV
KEEPVASENDKSEKKKKKNKHKNAENGDSALTAAVAGSDDEAIKSEKKKEKKKKKHKDAE
QE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtccagctttctcactccgagaagacgaagaagaagaaaagcaagtccaaa
gaagaagatgataacgatgccgttgatttcctgattaagccacagagctacacccccgcc
atcgacacctcccagtggccgattctgctcaagaactacgacaaactgaatgtacggacc
ggacactatacccctctcccctccggttactctcccttgaagcgtcccttagccgagtac
atcaaatacggcattttaaatctcgataagcccgcgaacccttcttctcatgaagttgtg
gcctggattaagcgcattttgcgtgttgagaaaactgggcattcgggtaccctcgatccg
aaggtcactggtaatctgatcgtttgtattgaccgagctacgcgcttggtgaaatcacag
cagggtgctgggatgggannnnnnnnngtttgcgtagctagattgcattcgaaggtgcct
gaagttgcgaaagttgcgagagcgctcgagactctcacaggtgcggtttttcagcgcccc
cctttgatttccgctgtcaagagacagcttaggattaggactatatacgaaagtaagctt
cttgagtatgatgcggataggcatttggttgttttctggatttcttgtgaggcgggaaca
tatgtgaggacactgtgtgtgcatttgggacttttgttgggtgttggtgggcatatgcag
gagttgaggagggtccggtcagggattctcggggagaaagataatatggtgactatgcat
gatgtgctggatgggcagtgggtttatgataattatagggatgagagttatttgaggagg
gtgattatgccactggaggtgcttttgactagttataagaggcttgtggtgaaggactct
gcggtgaatgcaatttgttatggtgcaaagttgatgattccagggttgttgaggtttgaa
aatgatattgaggtcggggaggaggtagtgttgatgacaacaaagggggaagcaattgca
ttagggattgcagagatgactactgcggtgatggctacatgtgatcatggaactgttgcg
aagattaaaagggtggtcatggatagggatacatatccgaggaaatggggattgggtcct
agagcttcgatgaagaaaaagcttattgctgagggaaagttggataagcatgggaagccc
aacgagaataccccagctgagtggtcgaggaatgttgttttgcctactggaggggattct
gtggttgccagtcttgcagcagctgcagagccacagccttctagtggtggaaatgtggag
ggtgctgttgttgaggttgataagaagaaaaagaagaaacataaggataaggaagatgat
ggagaggaggggcgcaagcgtaagctagatgcgcttgatggtagtcctgtaccagatgct
gttgttaagaaagccaaggtagatgctgctgaagatctgcaggtgaaagaaaaggctgaa
aatgtggaggtggaaccagagaaaaaagagaagaaaaagaagaagaagaaagagagtgca
gatgaagccatggcttctgatggcgagaaatctaagaaggataagaagaaggataaagtg
aaggaagaacctgtagcatcagaaaatgataagtcggagaaaaagaagaagaaaaacaag
cataaaaatgcagaaaatggcgactctgccttaactgctgcagtggctggaagtgatgat
gaagcaattaaaagtgagaagaaaaaggagaagaaaaagaagaagcacaaggatgctgag
caggagtag
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