Sesamum indicum (sesame): 105159728
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Entry
105159728 CDS
T04135
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105159728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105159728
Enzymes [BR:
sind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105159728
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105159728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
F-93_WHD
DUF2635
Motif
Other DBs
NCBI-GeneID:
105159728
NCBI-ProteinID:
XP_011075204
UniProt:
A0A6I9SXX3
LinkDB
All DBs
Position
LG4:complement(789557..805689)
Genome browser
AA seq
1701 aa
AA seq
DB search
MASTEVVEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCK
SCGQRAYHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLE
LIVKGDIVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQN
SQACWDSSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSNA
IRRSRLDVAHSGGGEERPSSEVVNASDYSWKDDSETAEANSFIAASDTPKKSSKKGVNQA
RNQGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCKLSGNVAGYSMFF
LESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWMDL
QLSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPYLA
VNEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLPSSKKM
RVAISRKLPSSRGLVSQSGKINELEFEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR
VLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTV
RGLIQDHIVGAVLLTLKNTFLTRSEFSQLLYGSGVFAGGPGSLAGKQSRKVSLVDSEGLV
ESVLPSIWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFTGSSYKNGEEDED
QNAEHNLLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNSAGILLSALSRLFTIFLQIH
GFTCGVDDLIILPHYDVQRKEKLEGEDVGEEVHCDFVKFKPGQIGHEELQLEIEKVICRD
RESATGALDMKMKNKLTNRLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTVNF
QQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFHCM
AGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHQT
SFLKNFKALEDNQETILQKYRNRRQFDSYIQKLPEGLEEEARRFIQEAGDLSSENQKASG
IKHLNKSRKARKKVTGKVQDKFIELVKQKYLSSLAQSGEPVGVIAAQSIGEPSTQMTLNT
FHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFLQWRSKHDVVSLVSNVKKVTVA
DLIESMEVQLSIHQARIYKLKMKLKDTEFVSLRDIQETLKTVFLRELEDAIENHVIFLSR
VSGIKNFMSSSRSEESNEAYEDDSGPRAQEEIDDDDADDDYDKGDDLGSDVQKRKQQASD
EMDYEDESDVDPGEDEGLGKGKSDGDHLEDIDTRKDEETDDFDDKDDASNVQNVDEVMAE
AKSSGKKDRAISKGIDKSIEELLSDKKIRRAIYMEVKGLSFEVHFTFTSEPHVLLAQIAQ
KTAKKVFIKRTGKISQCKVVQYDPDEKTVIWDNKKKPKKGDAEKQQADGEDSAYWAVKAS
GEDFKSIWEMQDDLDLSRLYSNNIHAMLKTYGVEAARATLIREVTQVFDIYGVKIDYRHL
SLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAASHALTDNLETPSSRI
CLGLPVKMGTGCFDLMQKLDI
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacggaggttgtggaggcggtgcgattcgggttcatgactgatgaagaggtg
aggaggcacagtgttgttaagatcacgaatcccaatttgcttgacatactggagaagcca
attcccggtggactctatgatcctgcaatggggccacttgatgaaaattctccatgtaaa
tcatgtgggcagcgtgcataccactgtcctgggcattgtgggcacattgaacttgtttct
ccggcctataacccattgctatttaatacgttgaataatcttttgaacaagacatgtttc
tattgctttcaatttcgaacaagcagacgagaggtggagaattgtgtttctcaattggaa
ctgattgtaaagggtgacattgttggtgcaaaaaggttgagtatgcgacaaaacttacaa
gacaagaaaaatatggactgggtcttatcagatgatatagttgatccggaggatagtcaa
gggagccatacatcacattcttcaggaatatctggtgatcagaatcactatgagcaaaat
agtcaggcatgctgggattcttctcagctcactgaagctatgtctgttcttaatgagttt
ttgaagaaaaaaggaaggaagtgcaagaactgtgaatgcaacaacccaaagctcaataaa
ccaacttttggatggtttcatgtgagtggcctatctgatactcagctccgatcaaatgcc
atccgaagaagcaggttggatgtggcacacagtgggggaggtgaggagaggccttcatct
gaggtggtaaacgctagtgactattcgtggaaggatgattctgagacggctgaagcaaat
tcctttattgccgcctctgatacccctaaaaagtccagcaagaaaggtgtaaatcaagca
agaaatcagggtctggaggagacaaataattatttttcaggacctcttttaccgtcagag
gttagggatattctgaggcgtttgtgggagaatgaagctcctctttgctcatacatgtgt
gatattcagcagcagcaatgtaaactttctggaaatgtagctggctactctatgtttttc
ttggagtctattcttgtacccccaataaaattccggcctccagccaaaggcggtgattct
gtgatggaacatcctcaaacggttctattggggaaagtgctgcagtcaaatattgcttta
ggaaatgctcatgttaacaatgctgagcgttcaaagattatcaatcgctggatggatctt
caactatccatcaatgtcttattcgatagcaaaactgcaaatagccaagctcaaaaagat
ggtacttctggaatttgtcagttccttgaaaagaaagagggtattttccgtcagaaaatg
atgggcaaaagggttaattttgcctgccggtctgttatatctccggacccttacttggca
gtcaatgaaattggaattcctccttactttgctttaagattaacctatccagagagggtt
actccttggaatgctggaaaattaagaggtgctgtaattaatggaccagaaatccatcct
ggagctacaacttacgttgatagtgtatcaactgtgaaattgccatcaagcaaaaagatg
cgtgttgcaatatctagaaaattgccttcttcgagagggttagtttcacaatcagggaag
atcaatgagcttgagttcgaagggaagtttgtgtatcgccatctgcaggatggggacatt
gtgcttgtaaatcggcagcctacactgcacaagccgagcataatggctcatgttgttcgt
gtattaaaaggagaaaaaacgcttcgcatgcattatgccaattgcagctcctataatgct
gactttgatggtgatgagattaatgtgcattttcctcaagatgagatttctcgtgcggaa
gcatacaacattgtaaatgctaatgagcagtatattgttccaactaagggtgatactgtg
agaggcttgattcaggatcacattgtaggtgccgtgctccttacattgaagaataccttt
ctaactcgtagcgaattcagtcagctgctttatggatccggcgtgtttgcaggtgggcct
ggttcacttgcaggcaagcagtccagaaaggtttctttagtagattctgaaggtctcgtg
gagtctgtcctgccttcaatatggaaaccagagcctctttggactggaaaacaggttatt
acagcattattgaaccatattacccgaggttgtgcaccttgtactgttaaaaaccagggg
aaagttccaaagaattatttcactggtagcagttacaaaaatggagaggaggatgaagac
cagaatgctgagcataacttgttaatttggaagaatgagcttgtgcgtggtgttattgac
aaggctcagtttggaaaatttgggttggtgcatacaatacaagagctttatggatctaac
agtgcaggcattttgctttctgcactcagccgtctatttacaatttttttgcagattcat
ggattcacgtgtggggtagacgaccttattatattacctcattacgatgtccaaaggaag
gagaaacttgagggtgaagatgttggtgaagaggttcactgtgattttgttaagttcaaa
cctgggcaaattggccatgaagagttgcagttggaaattgagaaagtcatatgcagagac
cgagaatctgcaacgggagctttggacatgaaaatgaaaaataaattgacaaataggtta
actagagaaggttctcagatcctcaaacatttactgactgcaggattattgaaacctttc
ccgaagaactgcatctcagtcatgacaaccacgggtgcaaagggtagcacggtgaacttc
caacaaatctctgcctatcttgggcaacaagagttggaaggaaaaagagtaccacgaatg
gtttctgggaagactttgccctgctttccaccctgggatttcacggctagagcaggaggc
tttattactgatcgttttctgacaggtcttcgacctcaggagtactatttccattgcatg
gctggtcgtgaagggttagttgacactgcagtaaaaacatctcgcagtggatatttacaa
cgttgtctaataaaaaatcttgagagcctaaaagtttgttatgattatactgttcgtgat
gctgatggttccatcatccaattttactatggagaagatggtgttgatgtgcaccagaca
agctttctcaaaaatttcaaggccctagaagataatcaagaaactattctccaaaaatat
cgaaataggcgtcaatttgatagctacatccaaaaattgcctgaggggcttgaagaagaa
gcaaggcgctttattcaagaggcaggagacctttcatcggaaaaccagaaagcaagtgga
atcaagcacctaaataaaagccgcaaggcgagaaagaaggtaactggaaaggttcaagac
aagtttatagagttggtgaagcaaaaatatctatccagtcttgcacaatcaggagaaccg
gttggtgtcattgctgctcagtccataggtgaaccatcaactcaaatgacactcaacaca
tttcatctggctggccgtggggaaatgaatgttacactagggattccacgtctccaggag
attttgatgactgcatctgatgttattaagactcccatcttgacgtgcccattcttgcaa
tggagatccaagcatgatgtcgtgtctttagtttcaaacgtgaagaaggtaactgtagca
gatttgatagagagtatggaagttcaactctcaatacatcaagctagaatttataagctg
aaaatgaaattaaaagataccgagtttgtgtcattaagagacatacaggaaaccctcaaa
actgtgtttctaagggagttagaggatgcaatagaaaatcatgtcatctttctttccaga
gttagtggcattaaaaatttcatgtctagttcaagatcagaagaatcaaatgaagcgtat
gaggatgattctggtccaagagcacaagaagaaattgatgatgatgatgctgatgatgat
tatgacaagggagatgatcttggttcagatgtacaaaagagaaagcaacaagcttcagat
gagatggattatgaggatgaatctgatgttgaccctggtgaagacgaggggttgggaaaa
ggaaaaagtgatggagaccatcttgaggatattgacaccagaaaggatgaggaaactgat
gactttgatgacaaggatgatgcttctaatgtacaaaatgtggatgaagttatggcagaa
gctaaatcaagtggcaagaaggacagagcaatatcaaaaggaattgataagtcaatagaa
gaattattatctgacaaaaaaatacgtcgggctatctacatggaagttaaaggattgtcg
tttgaagtccacttcacatttacatcagaacctcatgtattgctagctcagattgcccag
aaaactgcaaagaaggtattcatcaagaggactggcaagattagtcaatgtaaagtagta
cagtatgatccagatgaaaaaactgtaatttgggacaataagaaaaaaccaaagaaggga
gatgcggaaaaacaacaggctgatggagaggacagtgcttattgggcagtgaaggcatct
ggagaggattttaagtcaatctgggagatgcaagatgatcttgatctaagtcgtctgtat
tctaacaatattcatgccatgttgaagacatatggagtagaagcagccagagcaacactt
ataagagaggtgacacaagttttcgatatttatggagttaagatcgattatcgacattta
agtctgattgcggactatatgacacacaccggtggataccggccaatgagcagacatgga
agtatttctgagtcattgtcgccgttcctcaagatgtcctttgagacagcttctaagttt
atagttgaagccgcgtctcatgctctaactgacaacttggagaccccatcatctagaatt
tgccttggcttgcctgtgaagatgggtactggttgttttgacctgatgcagaagttggat
atttga
DBGET
integrated database retrieval system
