Sesamum indicum (sesame): 105160043
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Entry
105160043 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105160043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105160043
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105160043
Prokaryotic type
Archaeal type
TFB
105160043
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
ArfGap
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
105160043
NCBI-ProteinID:
XP_020548972
UniProt:
A0A8M8UR84
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All DBs
Position
LG4:2682012..2684341
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AA seq
343 aa
AA seq
DB search
MYIYPLVPQDSPTLINPDSYSGEKKNKFRKMSEENYCMDCRRPTTVVLDRASGDAVCLEC
GLVLESRFIDETAEWRNFADDSGGHDPNRVGSPVNPLLGDTVLSTVVSGGAVSGLTRVCR
RPDPDKVLFAFNIIADMADRLSLVATIKDRACEMYKKLHDQKSTRGKKLEILAAACIFIA
CRQEGKSRTVKEICSIVNGGESINRAGMKEFNRAVEFIKEKLKVEMGKSFIEMGTANAGD
FLKRFCSKLGMSHEDTRTVGXTIHNSEQLDIRRSPISIAAAVIFMINQLTGSKISLTDIA
RVTMVGEGTIKSTYRDLQPYAHRILPERYMKGWDLKNLGPGSV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatacccattagtcccccaagattctcccactcttataaaccctgactcttat
tctggagagaaaaaaaacaaattccgaaaaatgtctgaggagaattactgtatggattgt
cggcggccaactacggtggtgttggatagggcatccggcgacgccgtttgcttggagtgc
ggcctcgttctggaatctcggttcatcgacgagaccgctgagtggcggaacttcgccgat
gactccggcggtcacgaccccaaccgtgtcgggtcgcccgttaatcctctcctcggcgac
accgtcctgtctacggtggtgtccggtggtgcggtttctgggctgacccgtgtgtgccgc
cggcctgatcccgacaaagttctgtttgcctttaacatcattgcggatatggccgatagg
ttgagccttgttgctacaatcaaggatcgagcctgcgagatgtacaaaaagttgcatgat
cagaagtctacaagagggaaaaaactggaaattctggcagccgcttgcattttcatcgcc
tgcagacaagagggcaaatcacgaactgtcaaagaaatctgctccattgtgaatggagga
gaatccatcaaccgagccggaatgaaagaattcaaccgagccgtagagttcatcaaggaa
aaactgaaggtggagatggggaaatcattcatagagatgggaactgcaaatgcaggagat
tttctgaagcgtttctgttctaaacttggcatgagtcacgaggacactagaactgtcgga
taaaccatccacaactcagaacagctcgacataagaaggagtcctatatccattgcagca
gccgtcattttcatgatcaaccagctgacgggctcaaagatttctcttacagatattgct
agagtgacgatggtaggagaagggacgatcaagagcacttacagagatctccagccgtat
gcacataggatactgcctgaacgctacatgaaggggtgggatctcaagaacctcggcccc
ggtagtgtctag
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