Sesamum indicum (sesame): 105160617
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Entry
105160617 CDS
T04135
Name
(RefSeq) structural maintenance of chromosomes protein 6B isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105160617
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105160617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Sipho_Gp157
Crescentin
SbcC_Walker_B
SMC_hinge
DUF745
AAA_21
DUF1664
ApoO
DUF948
NPV_P10
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105160617
NCBI-ProteinID:
XP_011076383
UniProt:
A0A6I9T7D5
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All DBs
Position
LG4:complement(11015275..11031465)
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AA seq
1058 aa
AA seq
DB search
MADPRVSTGPTHVPNRPQAGIISRIRLENFMCHSNLEIELGDWVNFVTGQNGSGKSAILT
ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQGEDAFKPELYGDFIIVDRRIS
ESTSSIILKNSQGRRVGTRKEDLREIVEHFNIDVENPCVIMSQDKSREFLHSGNAKDKFK
FFFKATLLQQVDDLLKGIEKQLHDAKALVNQLEESLRPILKELDELQEKIKSMEFVEEIL
QQVQLLRKKLAWSWVYDADRKLDAQHKLIEKLKGRIPSCQARIDKQHHKMEELGDKLSKK
KSQISNMIERTSEVRSMKEDLKQNLSMAVKERLELESEQNRRTRQIQKMVERVKLLEQQI
HDLHEQYMKNTQAEENEMEEKLKKLQVEVDEVNANYQRLKEEEDEMAQRIAMLENEIVKI
TNQIEDVERTHRNISSRIRELQMHQRNKVTAFGGGRVASLLQAIERHQHKFSSPPIGPIG
AHVKLEDGEMWSIAIENAVGRVLNAFIVTDHKDARILRACAREANYNHLQIIIYDFSRPR
IDIPRHMLPQTNHPTVFSVMDSDNPTVLNALVDVASAERQVLVKDYDIGKIVAFDQRISN
LKEVYTSDGYKMFSRGSAQTILPPNKNLRGGRLCGSFDNEIKNLERDALEAKENVQKGRG
VKRGKEEDLRNLRDMLGSVKRRRIHVERQLRTKEFELEDMKKMLASEASAAPASTVDELH
REISKLHDEIQEKETLREELQKKVNEAGTKAKELKMSFENLCESAKSEIDALAEAESELM
MIEKDLHEAEAEKKYYEEQMHSKVLAELGNAEAECRDLERSCKESHRKASIICPESEIQA
LGGCKESDPEQLSAQLSRLKQRLERESQRFPESIDDLRMLCEKKERKISRKQQTYKAFRE
KLEACEKALELRWSKFQRNATLLKRQLTWQFNGHLKKKGISGQIKVSYEEQTLSVEVKMP
QDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDAI
VDFALSHGSQWIFITPHDISMVKHDERIKKQQMAAPRG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctagggtttctaccggtccaacccatgtcccgaaccgtccgcaagccggt
atcatatccagaatccgcctagaaaatttcatgtgccacagcaatctcgaaatcgagctt
ggcgactgggtcaattttgtcactggtcaaaatggaagtgggaaaagtgctatattgacg
gcgctctgtgtagcatttgggagccgggctcgtggcacgcaaagagcaaatacaatgaaa
gattttataaagactggctgcagccatgcacttgttcaagttgagataaaaaatcaagga
gaagatgctttcaagccagaattgtatggagacttcattattgtggaccgtagaatttca
gaatcaacaagttccatcatattgaaaaacagtcaaggtaggagggttggtaccaggaag
gaggatcttcgtgagattgtagaacacttcaatattgatgtagagaatccatgtgttatc
atgagccaggacaagagcagagaatttttgcattctgggaatgcaaaagataagttcaag
ttctttttcaaggcaactctccttcaacaagtggatgatctattaaaaggtattgaaaaa
caactacatgatgcaaaggccctggttaatcagttggaagagtcactgagaccgatattg
aaggaactggatgaattgcaagaaaagatcaaaagtatggaatttgtggaggagatatta
cagcaggtgcagttgttgagaaagaaactagcttggtcatgggtatatgatgctgacaga
aaacttgatgcgcaacataaattgatcgaaaagctaaaaggaaggatacccagctgccaa
gcacggattgacaagcagcatcacaagatggaagaattgggcgataaattgtcaaaaaag
aaaagtcagatatctaatatgatagaaaggacatctgaagtgagaagcatgaaggaggat
ttgaagcagaacctttctatggctgtgaaggagagacttgagctagaaagtgaacaaaat
cgcaggactaggcaaatccagaagatggttgaacgggtcaaattgcttgagcaacagatt
catgatttgcatgagcagtatatgaaaaatacacaggctgaagagaatgagatggaggaa
aagctcaagaaactccaagttgaagtagatgaagttaatgctaactatcagagattgaag
gaagaggaggatgaaatggcacaaaggatagctatgctagaaaatgaaatagtaaaaatt
accaatcagatagaagatgttgagagaacccatcgaaatatttcttcgcgtatccgtgag
ctccaaatgcatcaaagaaacaaggttactgcatttggaggaggtcgagtggccagtctc
ttgcaggccattgagcggcatcaacataaatttagcagcccaccaattggtcccattggt
gctcatgtgaaattggaagatggagaaatgtggtctatagctattgaaaatgcagttggc
agggtgctcaatgctttcattgtgacagatcacaaagatgcccgtattttgagagcatgt
gcaagggaagcaaactataaccacttacagattatcatatatgacttctccagaccaaga
attgacattccaagacatatgcttccccagactaatcatcccactgtattctctgttatg
gactctgacaatcctacggtgctcaatgcgttggttgatgtggctagtgctgagaggcaa
gtgcttgttaaagattatgatattggtaaaattgttgcctttgatcagaggatatcaaat
ctgaaggaggtttacacatctgatgggtacaagatgttttcccgtggttcagcccaaacc
attcttccccccaataaaaacttgagaggtggtcgtctttgtggttcatttgataacgag
attaaaaatctcgaaagagacgcattagaagcaaaagagaatgttcaaaaaggccgggga
gtaaaacgtggtaaggaggaagacttaaggaatcttcgagacatgttaggcagtgtgaag
agaaggcgtatccatgtcgagcggcaacttaggactaaggaatttgagctggaagatatg
aaaaaaatgcttgcctcagaagctagtgctgcacctgcatctactgtggatgagcttcac
cgagagatatctaaactgcatgatgaaatacaagaaaaggaaactttgcgggaagaactt
cagaagaaagtgaatgaagcaggaactaaagctaaagagctcaaaatgtcgtttgaaaat
ctgtgtgagtcggcgaagtccgaaattgatgcattagcagaagcagagagcgaactgatg
atgatagagaaagatcttcatgaagcagaagcggagaagaaatattatgaggaacagatg
cactctaaagtccttgccgaactgggaaatgcagaggccgagtgtcgggatcttgaacgc
agttgtaaggaaagtcatcggaaagcgtcaattatatgtcctgagagtgagattcaggcc
ttaggaggctgtaaggaaagcgatcctgagcaactcagtgctcaacttagtaggttgaaa
caaagacttgagcgcgaaagccaaagatttccagaatctatcgatgatctaagaatgttg
tgcgagaaaaaagagcgtaagatatcaagaaaacaacaaacttacaaagcctttcgagag
aagttggaagcatgtgagaaagccttagaattgagatggagcaagttccagaggaatgca
actcttctgaagcggcagctaacgtggcaatttaatggccatttgaaaaagaaagggata
agtggtcaaatcaaagttagctatgaagagcagaccctctcagtagaggtaaaaatgcct
caagatgcatcgagcagctctgttcgtgacactagagggctttcaggtggcgagcgttcc
ttttcaacattgtgtttcgcactcgcacttcatgagatgacagaagctccatttcgtgca
atggatgagtttgatgtatttatggatgcagttagcagaaaaattagcctggacgctata
gtggattttgcattgagtcacggttcacagtggatatttatcactcctcatgacataagt
atggtgaaacatgatgaaaggataaaaaagcagcaaatggcggctcctcgtggatga
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integrated database retrieval system
