Sesamum indicum (sesame): 105160679
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Entry
105160679 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105160679
Transcription machinery [BR:
sind03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105160679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
105160679
NCBI-ProteinID:
XP_020549187
UniProt:
A0A8M8URS3
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Position
LG4:complement(9288679..9291607)
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AA seq
425 aa
AA seq
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MGVVAVSSAAQTPVRLNARCSTRASSPKRRVMILSFKDDRSKNTSXEMEXXXXKKRVSAV
STNEASPSTLELDYSEAAAKLLEKIYKRSPATFVSDEEDCFKNEGSQRLKRAGEGEDTEK
KTVENVVRSQSKKXKRFSLEERIALKMKEQGGNLELFQKRKQSMKYEDEKIDRLXRDYSA
ATAFVSLDWRKMKIHHNLRLVLFVMNKYFQDFANGPRFQDLCRAGVKGLITAIDRFEPDR
KFRLSTYGLLFWIQHAIIRSLTLSSITKVSFGLESVRVEIQKAKQELLFELQRPPTDEEI
IERVGISPERYHEVMNLSKTISSLYAWYEVTQEEFINAXGVEGDNRRQPVLLRLALDDVL
DSLKPKESLVIRHRYGLXGKEDRTLGEIAGNLNMSREMVRKHELKVLMKLKHPARLDYLR
RYVFR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtggctgtttcttctgctgcgcaaactcccgtgagattgaacgcaaggtgt
tcgactcgtgcctcttcaccgaaaaggcgagtaatgatattatcattcaaagacgataga
agtaaaaatacatctnctgaaatggaaannnnnnnnnngaaaaaacgagttagtgctgtc
tcaacaaatgaagcttctccaagcacattggaactggattatagtgaagctgctgcaaaa
ctactagaaaagatatacaaaagaagccctgcaacatttgtctctgatgaggaggattgc
tttaaaaatgaaggaagtcaaaggctgaagagggctggagaaggggaggacacggagaag
aaaactgttgagaatgtggtgaggagtcagagtaagaagtgaaaaagattcagtcttgag
gagaggattgctttaaaaatgaaggaacaaggtggtaatcttgaattattccagaaaagg
aaacagagcatgaagtatgaagatgagaagatcgataggcttnttagggactattcagct
gccactgcttttgtcagcttagactggaggaaaatgaagatccaccacaatctccggctt
gttttattcgtcatgaacaagtattttcaagactttgccaatggcccaagattccaggac
ctttgtcgagctggggtaaagggtcttataactgctatcgataggtttgagccagatcgg
aaattccgactctcgacatatggcctactattttggatccagcatgccattattcgttct
ttgactctgtcaagcatcacaaaggtgtcctttggccttgaatcggtcagagttgaaatc
cagaaagccaagcaagagctattgtttgaacttcagagaccgccaactgacgaagaaatt
atagaaagagttggaatctctccggaacgatatcatgaagtgatgaacttgtcgaagact
atttcttctctctatgcatggtatgaagtaacgcaggaggagttcatcaatgcanntggt
gttgaaggagataacagaaggcaacctgtacttctcaggcttgctctcgatgatgtgctc
gactctctgaagcccaaggagagtttggtgatcagacataggtatggactcngaggtaaa
gaagacagaacacttggagaaattgcaggaaatttgaacatgtcaagagagatggttagg
aagcacgaactgaaagttctcatgaaactaaagcatccagctcgactcgattatcttcgt
cgctatgttttcagatga
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