KEGG   Sesamum indicum (sesame): 105160708
Entry
105160708         CDS       T04135                                 
Name
(RefSeq) WD repeat-containing protein RUP2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind04120  Ubiquitin mediated proteolysis
sind04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105160708
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    105160708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sind04121]
    105160708
Enzymes [BR:sind01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105160708
Ubiquitin system [BR:sind04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105160708
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105160708
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_DCAF4 WD40_Gbeta Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_like Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_WDR41
Other DBs
NCBI-GeneID: 105160708
NCBI-ProteinID: XP_011076489
UniProt: A0A6I9SZY6
LinkDB
Position
LG4:complement(10044467..10045930)
AA seq 386 aa
MKNFSSHSPLQNPQPSTTPLNPETGRGGEEKEEDQKARCEWDFNLSAVISSSDAGSTPSD
AIGVVEFNQNDSFLATGGIARKIRIYSLEKSLESCQKVETGVKFLDHAAACEFYICTPAK
LSSIKWKPGSGSRVIGSGDYDGVVMEYDLEKRVPVFERDEHGGRRVWSMDYSHWDPTIGA
SGSDDGTMQMWDPRCDGGKCLAVVQPNRVARSPVCCVEFNPFGRPLVAVGCADRRIYGYD
VRNLENPVLLLDGHQQAVTYTKFLDSRTIVSSAIDGCLMMWDTEDQRPIRTYRGHVNTRR
FVGLSVWRNGGLLSCGSENNQVFVYDKRWGEPIWVRGFAPAVQPRSEPGFVSGVCWRQAG
DERCMLVAGGSDGVLQVFEGERKSCS
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaaaaacttctcgtcccattctcccctccaaaacccgcagccaagcaccaccccatta
aacccagaaacaggacgaggaggagaagaaaaagaagaagatcagaaagcaagatgcgag
tgggatttcaatctctccgccgtaatttcttcttcggacgccggctccaccccttccgac
gccatcggagttgtcgagttcaaccagaacgatagctttctcgccaccggcggtatcgcc
agaaaaatcagaatttacagcttggaaaaatcacttgaatcgtgtcaaaaggttgaaacg
ggagttaagtttctcgaccacgcagctgcatgtgaattctacatctgtactccggctaag
ctcagtagcatcaagtggaaacccgggtcgggatctcgggtcatcgggtctggggactac
gatggggtggtaatggagtatgatctcgaaaagcgggtgcccgtttttgagcgcgacgag
catggaggtagacgtgtctggagcatggattactcgcactgggatccgacaattggggca
tctgggtctgatgatggcaccatgcaaatgtgggatccgcgttgcgacggggggaagtgt
ctggctgtggtccaacctaaccgggtcgcccgcagcccagtttgttgcgtggagttcaat
ccgtttggcagacccctcgtggccgtcggatgcgctgaccgtagaatttacgggtacgat
gtgcgcaatctggaaaacccggttctcctcctcgatggacaccaacaggccgtcacatac
acaaagtttctggattcacgaacaatagtttcttccgccattgatgggtgcttgatgatg
tgggacacagaggatcagcgcccgattaggacttacagaggacacgtcaacaccagaaga
ttcgtcggattatccgtttggagaaatggcgggctgttgagctgcgggtcggaaaacaat
caagtgttcgtgtatgacaagagatggggcgagcccatatgggttcgtgggttcgcaccg
gcagttcagccacggagtgaaccgggttttgttagcggtgtttgctggcggcaggccgga
gacgagcggtgcatgctggtggcgggtggttcagatggggtgttgcaagtctttgagggg
gaaaggaagtcatgctcgtaa

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