Sesamum indicum (sesame): 105160724
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Entry
105160724 CDS
T04135
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105160724
03036 Chromosome and associated proteins [BR:
sind03036
]
105160724
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105160724
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Helicases
105160724
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105160724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
105160724
NCBI-ProteinID:
XP_020548887
UniProt:
A0A8M8UR13
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All DBs
Position
LG4:10651477..10656872
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AA seq
653 aa
AA seq
DB search
MRTRRSAITASEIGEPMMNLTKRKKKMKYEKIEGVKPEDDTPNAVSSFRISNPLKEALKE
KGIESLFPIQAMTFNAVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTRASRKTGYGR
APSVLVLLPTRELATQVFSDFEVYGGALGLKSCCLYGGSPYQPQHVQLKRGVDIVVGTPG
RIKDHIERGNIDLSAIIFRVLDEADEMLRMGFVEDVELILSKVRDASKVQTLLFSATLPD
WVKHIAAKFLKQDKKTADLVGNEKMKASTNVRHIVLPCSSSARSQLIPDIIRCYSSGGRT
IIFTETKDSASKMSGLLPGACALHGDIQQATREVTLSGFRSGKFSTLVATNVAARGLDID
DVQLIIQCEPPRDVEAYIHRSGRTGRAGKTGIAVMLYDPRKSNFSKIERGSGVKFEHISA
PQPADIAKAAGAEAAQKIAEISDSVIPVFKAAAEELLNSSVLSPTELLAKALAKAAGYTE
IKSRSLLTSMENYVTVLLQCGRPIYTLSFAYGVLRRFLPEENVESIKGLALTADGKGAVF
DVAAADLDNFLACKKNAAGIKLEEVKSLPRLRERDQARGGRFGSGGQGGFSSGRGGFSGG
RGGGGGRGSFSDRKDGRFSGGRGGRGGFSDRRNDRFSRGRGGGRGCGNNNHNW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgaggagaagtgccatcactgcttccgagattggagagccgatgatgaatctc
actaagaggaaaaagaagatgaaatacgagaaaattgagggggtgaaacccgaggacgac
acccctaacgcagtctccagtttcaggatttcaaacccattgaaggaggcattgaaggag
aaggggatcgaatcactgtttccgattcaggctatgacgttcaacgccgttctcgatggc
tctgatttggttggcagagcgcgcactggccagggaaagacattagcttttgtcttaccc
atactggaatcattgacaaatgggcctacaagagcatcgagaaagactggatatggaagg
gcgcccagtgttcttgtgcttttacccactagggaactggccacgcaggtgttttctgac
tttgaggtctatggtggagcattagggttgaaatcgtgttgtctgtatgggggttctccc
taccagccacaacatgttcaattgaaaagaggtgtcgacatagtagttggcactcctggt
cgcattaaggatcatatagagagaggaaatattgacctgagtgcaataatattccgagta
cttgatgaggctgatgaaatgctgaggatgggctttgttgaagatgttgaacttattcta
agcaaggtaagggatgcaagcaaagtccaaacgcttctttttagtgccactttgccagac
tgggtgaagcatattgcagctaaatttctcaaacaagataagaaaactgctgatcttgtt
gggaatgagaaaatgaaggccagcaccaatgtgaggcatattgttctgccttgctctagt
tcagccagatcccaacttattcctgatatcattcgctgctatagtagtggcggtcgaact
attatttttacggaaaccaaggattctgcttctaagatgtccggattactacctggagcc
tgtgctttgcatggggacatacaacaggctacacgtgaggtcacactttctggattcagg
tctgggaaattttcaacacttgtggccacaaatgtggcagcacgtggattggatatcgat
gatgtccagctaattattcagtgtgagccacctcgtgatgtagaagcatacatacatcgg
tctggaagaacagggagagcagggaaaactggcattgcagtaatgctttatgatccgagg
aagtcaaatttctctaagatagaaagaggatcgggggtaaaatttgaacacatatcagct
ccacagccagctgatatagctaaagctgctggtgcagaagctgctcaaaaaatcgctgag
atctctgatagtgtcataccggtatttaaggctgctgctgaagagctactgaactcatct
gttctatccccaacggagctactggcgaaggcactggccaaggctgctggttatactgag
atcaagagtcggtcacttctcacttcaatggagaactatgttactgtcctcctccagtgt
ggacggcccatttacacactatcctttgcttacggggttctacggagatttttgcctgaa
gagaacgtggaatcaattaagggtcttgctttgactgcggatgggaagggtgcagtgttt
gatgtggctgctgcagatttggacaacttccttgcttgtaagaaaaatgctgctggtata
aagctagaggaagtgaaatcattgccacgtttgcgagaaagagaccaagcaagagggggg
agatttggaagtggtggacagggcggattctctagcggaagaggtggcttctctggtgga
agaggtggaggtggtggacgtggcagcttctcagataggaaagatggtaggttctccggt
ggcagaggcggaagaggaggattttctgataggcgaaacgatagattctcaagaggtcga
ggtggtggaagaggttgtggaaataacaaccacaactggtga
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