Sesamum indicum (sesame): 105160778
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Entry
105160778 CDS
T04135
Name
(RefSeq) RING finger and transmembrane domain-containing protein 1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105160778
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105160778
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105160778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
zf-ANAPC11
DUF1451
zf-C3H2C3
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
105160778
NCBI-ProteinID:
XP_011076564
UniProt:
A0A6I9T177
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All DBs
Position
LG4:11775935..11779952
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AA seq
461 aa
AA seq
DB search
METSDSAAADLDSGSPSSPSNGGGTIRIVQFPALGFLQSPISSLLEYSGFIRVRPDYPYS
ETRPLVSESTNASVNVQSSGSNSASVNGNDGVDRSGDSNSGDSSNNGEVSIRIIGEQDRV
GGANNGETGGNGVGLGAEGSVVGPDDVNGNRRVNSDNDNNNREALSYQRYDIQQAARWIE
QILPFSLLLLVVFIRQHLQGFVVTIYCTAILFKSNDILRKQTALKGERKISVLAGYSVLF
MLHIFGIYWWHHRDDLIYPLLMIPPKAIPPFWHAVFIILVNDTMARQTAMVLKLVLLMYY
KNGRGHNFRRQGQMLTLVEYTLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKL
TSIVEKVQSFFAALKALSRKEVHYGSYATPEQVNAAGDLCAICQEKMHVPVLLRCKHIFC
EDCVSEWFERERTCPLCRALVRPADLQSYGDGSTSLFFQLF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatcggattctgctgctgcggatttggattctgggtcaccttcatcgccaagc
aatggtgggggaacaattagaatcgttcagtttcctgctctcgggttcttgcagtctccc
atttcatcgctgctcgagtattccggcttcatccgggtaaggccggattacccctattcc
gagacccgtcctctcgtatctgagagtactaatgccagtgtcaatgttcaaagctctggc
agcaattcagcgtcagttaacggtaatgatggtgttgataggagtggagatagcaattct
ggtgatagcagtaacaatggggaggtctcgattcggattatcggggagcaggatagggtt
gggggtgcgaataatggcgagactggtggtaatggggtgggattgggtgcggaagggtct
gtcgtcgggcctgatgatgttaatggaaataggcgtgttaatagtgataatgataacaat
aatagggaagcattgtcgtatcaaagatatgatatacagcaggcggctaggtggattgag
cagattcttccgttttcgttgctgttgttggttgtttttatccggcagcacttgcaagga
tttgttgttaccatttattgtaccgccatcttgttcaagtccaacgacattctacgcaag
caaactgctctaaagggagaaaggaagatttccgtcctagctggttattcagttcttttc
atgcttcatatatttggaatctactggtggcatcatagagatgatcttatctatccattg
ctcatgattcctccaaaagcaatcccacctttctggcatgcagtatttatcatcctggta
aatgatacaatggcacgtcagacagcaatggtcttgaagttggttctattaatgtattat
aagaatggtagagggcacaatttccgcagacaggggcaaatgttgactttggttgagtat
acactgcttctgtaccgtgctttgttgccgacccctgtatggtatagattcttcctgaac
aaagactatgggagtctcttttcatcgctgacgacaggattgtatttaactttcaagcta
acatcaattgttgagaaggttcaatctttcttcgctgccttgaaggcattatccaggaag
gaagtccactatgggtcttatgcaacacccgagcaggtaaatgcagctggagatctatgt
gctatatgccaggagaagatgcacgtgcccgtcttactacgctgcaagcatatattctgt
gaagactgtgtttcagaatggttcgagagagagagaacctgccctttatgcagagcgctg
gttagaccggctgatcttcaatcatatggggatggatcaaccagtcttttcttccagttg
ttttag
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