Sesamum indicum (sesame): 105160907
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Entry
105160907 CDS
T04135
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105160907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105160907
Spliceosome [BR:
sind03041
]
Complex B
Other components
Prp19-related factors
105160907
Complex C
105160907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
105160907
NCBI-ProteinID:
XP_011076727
UniProt:
A0A6I9T1L0
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Position
LG4:13145782..13148378
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AA seq
599 aa
AA seq
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MVALTDILPKAKSSVNTNYDHSNDPWFKSRYSLSEDGDTEAPKAKPVPPYLKRAGFKPSK
PEDFGDGGAFPEIHYAQYPLGMGRSTNQKPGGKTLPLTVDERGNLRYDAIVRQNENAKKI
VYSQHSDLVPIFAKDNEEEEDMEVDEKQKEIDETTQETKAALEKIVNVRLSAAQPKNVPT
QSSDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVM
HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA
LYVAEQKAREAVAMRSKVQKEMMMKEKEKKEMELRELARKARSERTGVAPAAAVPMPSER
GGVSDGDMNIDYERVRDAPKETKEEREERLQREKIREERRKERERERRLEAKDAAMGKKS
KITRDRDRDISEKVALGMASTGTRGGEVMYDQRLFNQEKGMDSGFATDDAYNIYDKGLFT
TQSTMSTLYRPKKDADDEMYGGADEQLEKLMKTERFKPDRAFAGTSERTGPRDRPVEFDK
DQPPEEDPFGLDQFLTEVKTGKKAMDKVGSGGTLKASAGSMRDGFEGSGRSRIAFDKGR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggtggccttgacagatattcttccgaaggcaaagtcatcggtgaacactaattatgat
cattctaacgatccatggttcaaaagtaggtatagtttgtctgaggatggagatactgag
gccccaaaggctaagccagtgcctccttacttgaaacgcgcggggttcaagccgtcaaag
cctgaggactttggggatggaggggcgttccctgaaattcactatgcacagtacccgctt
ggcatggggcgaagtacgaatcagaaaccaggtgggaagactttgcctctcacagtggat
gagcgtgggaacttgagatatgatgctattgtgaggcagaatgaaaatgcgaagaagatt
gtgtattctcagcactctgaccttgttccgatctttgcgaaggataatgaggaagaagaa
gatatggaggtggatgagaagcagaaagagattgatgagacgacccaagagactaaggct
gcacttgagaagattgtgaatgtcaggttgagtgctgcacagccaaaaaatgttcctaca
cagtcttcagactctaagtttattaagtacaagccatctcaacagtcagctgcctttaat
tctggggctaaagagagaattattcgcatggtggagatgccagtggatccattggagccg
ccgaagtttaagcacaagagggttccaaaagcttctggctctccaccggtgcctgttatg
cattctccacctcggcctgtgactgttaaagaccagcaagactggaagatcccaccttgc
atctctaactggaagaacccaaagggatatacaataccactggacaagcgtctggcggcg
gatggtcgggggcttcaggacgttcagattaatgacaattttgccaagttatctgaggct
ctatatgttgctgaacagaaagctagagaggctgttgcaatgcgatcaaaggttcagaag
gagatgatgatgaaggaaaaggagaagaaagagatggaactgcgggagctggcccggaag
gcaagatctgagagaactggtgttgctccagcagctgctgtgccaatgccttctgagagg
ggcggtgttagtgatggtgatatgaatattgattatgaacgtgtcagagatgcacccaag
gaaacaaaagaagagagagaggaaaggttgcaaagggaaaaaattcgtgaggagaggcgc
aaagagagggagagggaaagaagactggaggcaaaagatgccgctatggggaagaagagc
aaaattaccagggatagagatcgtgatatcagtgagaaagtcgctctcggaatggcctcc
actggaacgagaggtggtgaagttatgtatgatcagaggttgtttaaccaagagaaaggg
atggattctggttttgccaccgatgatgcttacaacatctatgacaagggcttgtttact
actcaatctacaatgagtactctgtataggcctaagaaagatgcggatgatgagatgtat
ggtggtgctgatgagcagctggagaagctgatgaagactgagcgctttaagcctgacagg
gcatttgcaggcacatctgagaggactggtccaagggacaggcctgttgagtttgataaa
gaccagccacctgaagaagacccatttggtctggatcaattcttgacagaggttaagaca
ggtaagaaagcaatggacaaagttgggagcggaggtaccttgaaggctagtgctggatcc
atgagagatggcttcgaggggtcaggtagatcacgaattgcatttgacaaggggcgctga
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