Sesamum indicum (sesame): 105161119
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Entry
105161119 CDS
T04135
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105161119
Membrane trafficking [BR:
sind04131
]
Protein recycling
Others
EARP complex
105161119
Endosome - Golgi transport
Tethering complex
GARP complex
105161119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
RINT1_TIP1
COG4_N
Vps54_N
DUF6284
HTH_Cmi2_C
XhlA
Motif
Other DBs
NCBI-GeneID:
105161119
NCBI-ProteinID:
XP_011077011
UniProt:
A0A6I9T0P5
LinkDB
All DBs
Position
LG4:15347290..15362666
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AA seq
825 aa
AA seq
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METIDKQSAVDFINQMFPTEASLSGVEPLMQKIHSEVRRVDAEILAAVRQQSNSGSKARE
DLAAATRAVQELIYKMQEIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDFPKITELREKFKSIKQILKSHV
FSDFSSLGTGKESEETNLLQRLSDACLVVDALEPSVREELVKNFCSRELTSYHQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKIFPSSWHVPYLLCIQFCKLTRTQLVDILNNLKEK
PDVGALLLALQRTLEFEEELAEKFGGGSRSKESGTDIGEDMVDNNNQTVSDIRKKYEKKL
AANHGSENEEQDGHKDLSVPDAGFNFRGIISSCFEAYLTVYVELEEKTLMEHLEKLVQEE
TWEIEEGSQTNVLSSSMQVFLIIRRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFAR
LPKGGTGIVAAATGMDGQIKTSDKDERLICYIVNTAEYCHKTSGELAENVSKIVDPQFAD
RIDMSEVQDEFSAVITKALITLVHGIETKFDTEMAAMTRVPWGTLESVGDQSEYVNGINT
ILTASIPVLGRLLSPIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKT
ILLEIPSLAKQTSAAAAYSKFVSREMSKAEALLKVILSPVDSVADTYCALLPEGTPGEFQ
RILDLKGLKRTDQQSILDDYNKRGAGTYQPSMKPVVPAAPNTTAAPGTATQPTPAGIIPL
KEELVARAAALGRGAATTGIRRILALTESTTKDRKDGPLRKLFIG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagacaattgacaagcagagtgctgtggatttcatcaaccagatgttccccacagag
gcctctctatctggtgttgagccccttatgcaaaaaatacatagtgaagttcgtagagtg
gatgctgagattttggcagcagttcgtcagcagagtaattcaggaagcaaggccagggag
gatcttgctgcagctacccgtgctgttcaggaactcatttataaaatgcaagaaataaag
accaaagcagagcaaagtgaaacaatggttcaggaaatttgccgtgacatcaagaaactg
gattttgctaagaagcacataactactacgattactgcccttcatcgtcttaccatgcta
gtgtctgctgtagaacaactccaagttatggcttctaaaagacaatacaaggaggcagct
gcacagctcgaggctgtcaaccagttatgcagccattttgaagcttatagagattttccg
aagatcacagagcttagggagaagtttaaaagtatcaaacaaatcctgaagtcacacgtg
ttttcggatttctctagcttaggtacagggaaagagagtgaagaaactaatttactgcag
cggctatctgatgcatgtctagttgttgatgctctggagccatcagtcagggaagagttg
gtcaagaacttctgcagcagggagcttacttcgtatcatcaaatttttgagggagcggaa
ctggcgaagctggataaaacagaaagaagatatgcttggatcaaacgtcgattaaggacc
aatgaggagatttggaaaattttcccgtcttcatggcatgtcccctatctgctctgcatt
cagttctgcaagttgacgaggacacaacttgtagacatcctcaacaatcttaaagaaaag
ccagatgttggagcattattgctggcattgcaacggactctggagtttgaggaagaatta
gcagagaaatttggtggtggaagccgtagcaaagaatctggaactgacattggggaagat
atggtggacaataacaatcagacagtgtcagacattcgaaagaaatatgagaaaaagctt
gctgcaaatcacggaagtgagaatgaggagcaagatggccacaaagatttatcagtgcct
gatgctgggttcaattttcgaggtatcatttcgtcctgctttgaagcttacttgacagta
tacgtggagctggaagagaagacccttatggaacatctggagaagcttgtccaggaagaa
acttgggaaattgaagaggggagtcaaactaatgttttatctagcagtatgcaggtcttt
ttgattattaggaggagcttaaagagatgcagtgccttgacgaagaatcagacattgttt
aatttgttcaaggtattccaaagaattctcaaagcatatgctacaaaactttttgcaaga
ttgccaaagggaggcacaggaattgtagcagctgctacaggaatggatggtcaaatcaag
acatctgacaaggacgaacgtctgatctgttacatagttaacactgctgaatattgccat
aagacgtcaggtgaattggctgaaaatgtctccaagatagttgatcctcaatttgcagat
cggatagatatgtctgaagtacaggatgagttctcagcagttataacaaaagcattgata
actcttgtgcatggtatagaaactaaatttgatactgaaatggctgcaatgacacgtgtt
ccttggggcacacttgaaagtgttggtgaccaatcagagtatgtgaatggcataaacacg
attctgacagctagcattcctgtacttggaaggcttctttctcctatatatttccagttt
tttcttgataagcttgcatcatctctagggccacgcttctatctcaatatattcaaatgc
aagcaaatatcggaaactggagctcagcaaatgctcttggacacgcaagccgtaaaaacc
atccttctggaaattccttcccttgcaaaacagacatcagctgctgcagcctactcaaaa
tttgtaagccgtgaaatgagcaaagctgaagcactgctaaaggtaatactgtcccctgtt
gactctgtagccgatacgtactgtgccctgctgcctgagggtacacctggagagttccag
cggattctggacctaaagggcctcaaaaggaccgaccagcaaagcatattagacgattac
aacaaacgtggagcgggtacttatcagccatctatgaagccagtcgttccggctgcacct
aacacgacagctgcacctgggacagctactcaacctacgcctgctggaatcattcctctg
aaggaagaacttgtggcaagagctgccgcactcgggagaggtgctgccacaactggaatc
cggagaatcctggcattaactgaatcaacaaccaaagatcgtaaggatggacctctcaga
aagcttttcattggatga
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