Sesamum indicum (sesame): 105161157
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Entry
105161157 CDS
T04135
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105161157
03036 Chromosome and associated proteins [BR:
sind03036
]
105161157
Transcription factors [BR:
sind03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105161157
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105161157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
105161157
NCBI-ProteinID:
XP_011077060
UniProt:
A0A6I9T903
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Position
LG4:complement(15691341..15711677)
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AA seq
1354 aa
AA seq
DB search
MVEEKDVEKKEEEIEAVGADSSDDYLGDDNEGEEEEEEEEEEESHSEEPLTEEEIEELIA
ELLEVESKAAEAQEALEEESLVKVEADVRKELAQSLSGDELDKAVTEEMTTLKEEWEVEL
DKLETESAHLLEQLDGAGIELSSLYKWIERQAPNVCCTEAWKKRTHWVGNQMPTDATESV
AQAEEYLQIHRPVRRRHGKVLEEGASGYLGKKVVTSESSVAVNDSMNVDWDSFSKMCSDR
SSLEDVSFGSKHWASVYLASTPQQAAELGLKFPGVDEVEEIDDVDGTSSDPFIADAVANE
GDLNLTEEQKRNFRKVKEEDDANADRKLHNRLKRRRLKKQRKEDAIQGELSSVVGLRERQ
LDGSMVHEDGTAKNEIEDQEIINIVPELSGFVDGEKAKSDNDASASVDLVESRGVKRSSD
NERPSDDNKCTITIESDDEAEVAVNRSPHMDEATKSESQISSSSDSDSDSDVGVHSSTKK
RRKKKIRRIIDDAELGEETKKKIAIEKERQERLKSLEARFSTQSVMMSSAVTNGSSFDGT
GLEVLGDTSSGYIVNVVREEGEEAVRIPPSISMKLKLHQIAGIRFMWENIIQSVRKVRSG
DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLKTALIVTPVSVLHNWRHEFMKWRPS
ELKPLRIFMLEDVPREKRVELLMKWRIKGGVFLIGYTAFRNLSLGKYVKDRYMAKEISRA
LQEGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG
FLGSSHEFRNRFQNPIENGQHTNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP
PKTVFVISVKLSPLQRKLYKRFLDVHGFTKDKVSGEKIIKRSFFAGYQALAQIWNHPGIL
QLRKENKDSGKYEDIEDGSSSDENVDYNVISGEKLVNPQRKSDNGFLREDWWRDLLMENN
YKDADQGGKMVLLLDILTMCSSMGDKALVFSQSILTLDLIEFYLSKLPRPRKNGKCWRKG
KDWYRLDGRTESSERQKLVERFNDPFNRRVKCCLISTRAGSLGINLHAANRVIIVDGSWN
PTYDLQAIYRVWRYGQTKPVFAYRLLAHATMEEKIYKRQVTKEGLAARVVDRQQVHRTMS
KEEILHLFDFWDDENADIMPELGQETDPNTTCRVGNLLKQKLPLPHGSSSSDKLIETLIS
RHHPRWISNYHEHETLLQENEDEKLSKEEQDLAWEVYRKTLEWEEVRRVFPDANLFEQQK
ISVEEHAPSQQQRPVVEPVVEQKSDLSTVKAPKQDHALERARQRHRYTYRLRDCTNLSHI
MTLKSQRVKMGGGAICGECAQLVRWEDIKPDPRF
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaaaaggacgtagagaagaaagaggaagaaattgaggctgtgggagctgat
tcttccgacgattatcttggggacgataatgagggggaggaggaagaagaagaagaagaa
gaagaagagtcgcattctgaggaacccttgaccgaggaggagatagaagagctcattgct
gagcttttagaagttgagagcaaagctgcggaagctcaagaggcattggaagaggaatcc
ctagtcaaagtagaggctgatgttaggaaagaattggctcaatctctgtctggtgatgag
ttggataaggctgttacagaagagatgacaacattgaaggaggagtgggaagtggagctt
gacaagcttgagaccgagagtgctcatttactggagcaacttgatggtgctggtattgag
ctctccagtctctataagtggattgaaaggcaagctcctaatgtttgctgcactgaagca
tggaagaagaggactcactgggttggaaatcaaatgcccactgatgctactgaatcagtt
gcacaagctgaagagtatctccagattcacaggcctgtgagaaggcggcatggcaaagtc
ttggaggagggtgccagtggttacctgggaaagaaagttgtgacaagtgaaagcagtgta
gctgtaaatgatagtatgaatgtagattgggattctttcagcaaaatgtgctctgatagg
tcatctttggaggatgtctctttcggcagcaaacactgggcttctgtctacctggccagc
acaccacaacaggctgctgaactgggcctaaaatttccaggagtagatgaggtggaggag
attgatgatgttgatggtacttctagtgatccgtttattgcagatgctgtagcaaatgaa
ggagatttgaatcttactgaagaacaaaagagaaactttagaaaggttaaagaggaagat
gatgcaaatgctgatcgcaagcttcataatcgtttgaaacgaaggagacttaagaagcag
cggaaagaggatgctattcagggagaactttcctcggttgttgggctaagggagcgacaa
ttagatggttccatggttcacgaggatggaactgctaaaaatgagatcgaagatcaagaa
ataattaatatcgtgccggagttgtctggttttgttgatggagagaaagcaaagagtgac
aatgatgcctctgcttccgtggacttagtcgagtcgaggggggtcaagcgttcaagtgat
aatgaacgaccctctgacgataacaaatgcacaattactatagaaagtgacgatgaagcc
gaagtcgctgtaaatagatcgccgcatatggacgaagccaccaaatcagaaagccaaata
tcctctagttcagattctgattcagattctgatgttggtgtccattccagcactaagaaa
agacgtaaaaagaaaatccggaggatcattgatgatgctgagttgggggaagagactaag
aagaaaattgccattgaaaaggaacgtcaagagcggcttaaatctttggaggcacgattt
tctacacagtctgttatgatgagttctgcagtcactaatggtagttcatttgatggaact
ggcttagaagtgctgggcgatacttcttcaggatacatagtaaatgttgtgagagaggaa
ggtgaagaggcagtgcggattcctcccagcatctcgatgaaattaaaactccaccagatt
gcagggatcagatttatgtgggaaaatattattcagtcagtgagaaaagtgaggtccggt
gataaaggtcttggatgcattttggctcatacaatgggtttaggtaaaacttttcaggtc
attgcttttctgtacactgctatgagaagtgtggacctagggttgaaaactgcactcatc
gtgacaccagttagtgttctacacaattggagacatgagtttatgaagtggagaccgtct
gagctaaagcctcttcgtatcttcatgcttgaagatgttccaagggagaaaagggttgag
ttgctcatgaagtggagaatcaaaggtggtgtcttcttgattggctatactgccttccgt
aacttgtctcttggaaagtatgtcaaggaccgatacatggctaaggagattagtcgtgca
cttcaggaaggacctgatatcctagtctgtgatgaggcccacattatcaagaacactagg
gctgatacaacccaggcactgaaacaagtgaagtgccagagaaggattgcattaactgga
tcgcctcttcagaacaatctgatggagtactactgtatggttgattttgttagagaagga
tttctaggcagcagccatgagtttaggaaccgtttccaaaatccaatagaaaatggtcaa
cacaccaattctactgcagaagatgtgaagataatgaaccaaaggtctcatattctgtat
gaacagttaaagggatttgttcagagaatggacatgaacgtggttaaaaaggatttgcct
cccaaaactgtatttgttatctctgttaagttatctccattacagagaaaactgtataag
agatttcttgatgttcatggtttcacaaaggacaaggtttctggtgaaaagataattaag
agatcattttttgcagggtaccaggccttagctcagatatggaaccatcctgggattttg
cagttgcggaaagaaaacaaggactccggtaaatatgaagacatagaagatggcagctca
agcgatgagaatgtggattacaatgtgatctctggagagaagctggtgaatcctcaaaga
aaaagtgataacggatttctgcgtgaggattggtggagagatcttcttatggaaaataat
tacaaggatgccgatcaaggtgggaaaatggttttgctacttgatattctcacaatgtgc
tcaagcatgggcgacaaggcactggttttcagccagagtatattaactctggacctgatt
gaattttatctttcgaaattgcctcgtcccaggaagaacggaaaatgctggagaaagggg
aaggattggtacaggttagatggaagaactgagagctccgagaggcagaaattggttgag
aggttcaacgatcctttcaatagaagggtcaaatgctgtttgatttcgactagagctgga
tctctggggattaatcttcatgcagctaaccgagtaattatagttgatggatcttggaat
cctacatatgatcttcaggcaatatatagggtctggaggtacggccaaacaaagcccgtc
tttgcataccgattgctggcacatgctacaatggaggaaaaaatttataagcgtcaggta
actaaggaaggccttgcagctagggttgtcgataggcagcaggtgcataggacgatgtca
aaagaagaaatattacatttgtttgatttttgggacgatgaaaatgccgacataatgcct
gagttgggtcaagagactgacccaaatacaacttgtcgtgttggaaacttattgaagcag
aagctgccacttcctcatggaagttcatcttcggacaaattaattgagactttgataagc
agacatcatcccaggtggatttcaaattaccatgaacatgagaccctcttgcaagaaaat
gaagacgagaaactgtcgaaagaagagcaggacttggcttgggaagtataccggaaaacc
ctcgagtgggaggaggttcgacgagtttttccagatgcaaacctatttgagcagcagaaa
atctccgttgaagaacatgcaccgagtcagcagcaaagacctgttgttgaacctgtggtc
gagcaaaagtctgatctttcaactgtgaaggctcccaaacaggaccatgcacttgaacga
gccaggcaacgccatcgatatacttacaggctgcgagattgcacaaatctttcgcacata
atgaccttaaagagtcagagagtgaagatgggtggcggtgcaatatgtggggaatgtgct
caattggtacgatgggaggacatcaagccagatccaaggttctag
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