Sesamum indicum (sesame): 105161209
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Entry
105161209 CDS
T04135
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
sind04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105161209
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105161209
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105161209
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105161209
03036 Chromosome and associated proteins [BR:
sind03036
]
105161209
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105161209
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105161209
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105161209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
CLASP_N
Cnd1
TAF6_C
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
105161209
NCBI-ProteinID:
XP_011077133
UniProt:
A0A6I9T955
LinkDB
All DBs
Position
LG1:10185317..10192093
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSVIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDLLKTELRSIYSQLCQDDMPMVR
RAAATNLGKFAATVEAANLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMVTNPHYLYRMTVLQAISLLAPVMGSEITCSKLLPVIVTASKDRVPNIKFNVAKVLQS
MIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgagccactgtatccgatagcggtactaatagatgaattaaagaat
gatgacattcaactgcgtttgaactctatacgtagactatccaccattgcgcgtgcactt
ggggaagagaggactcggaaggagttgattccatttttgagtgagaacaatgatgacgat
gatgaggtgctccttgctatggctgaagaattgggtgtttttattccatatgttggagga
gtggagcatgctcatgtcttgctccctcctctggaaacactatgtactgtggaagagacc
tgtgtgagggacaaagcggtggagtcattgtgcagaattggatcacagatgagggagagt
gatttggttgattcggttattcctcttgtgaagaggttggcagctggtgagtggtttacg
gctcgtgtctcagcttgtggattatttcatattgcttacccgagtgccccagatctgtta
aagacagaattaaggtcaatatacagccaattgtgtcaagatgatatgccaatggtaaga
agggctgctgcgacaaatttggggaaatttgctgccactgtggaagctgctaatctcaag
actgatatcatgtctatgtttgaggatcttacccaggatgatcaagattctgttcgctta
ctagcagttgagggctgtgctgctcttggcaagttgttggagcctcaagattgtgttgcc
catattctccctgtaattgtcaacttctcacaggataaatcttggcgtgttcgctacatg
gttgccaatcagttgtatgagctttgtgaggctgtgggacctgaacctactaggacggat
ttggttcctgcttatgtgcgcctactccgagataatgaagcagaagtgcgaattgcagct
gctggaaaagttacaaaattttgtcggatcctcaatccggaacttgctattcagcatatt
cttccctgtgtaaaggaattatcatctgattcttcacagcatgtaaggtcagctttggca
tctgtcattatgggaatggctcctgtgttaggaaaggatgcaacaattgaacaacttctt
cctatatttctctcccttttgaaagatgagtttcctgatgttcgcctcaatattattagc
aagctagatcaagtcaatcaggttattggaattgatttactctcacagtctctattacca
gctattgttgagcttgcagaggataggcattggagggttcggcttgccatcatagaatat
atacctttattggctagtcagttgggtgtcggattttttgatgataagctgggtgctctt
tgcatgcagtggctgcaggacaaggtttactctatccgggatgctgcagctaataatttg
aagcgtctggctgaggagttcggtccagagtgggcaatgcagcatatagttccccaggtt
ttggatatggtaaccaatccgcattatttgtatcggatgaccgttcttcaggcaatttca
ttacttgctcctgtcatgggttctgagattacatgttctaagttgttgcctgtgatcgtt
actgcatcaaaggatagggtacccaacatcaagtttaacgtggctaaggtgttgcagtcc
atgatccccattgttgatcaatccgtggtggagaaaacaatacgccccagtttggtggag
ctttctgaggaccctgatgtagatgtccgtttctttgcgaaccaagcacttcagtcgatc
gacaatgtgatgatgtcgagctag
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