Sesamum indicum (sesame): 105161369
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Entry
105161369 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105161369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105161369
03009 Ribosome biogenesis [BR:
sind03009
]
105161369
04131 Membrane trafficking [BR:
sind04131
]
105161369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105161369
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105161369
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105161369
Membrane trafficking [BR:
sind04131
]
SNARE
SNARE associated proteins
Others
105161369
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105161369
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105161369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
ABC_tran
AAA_lid_PRS2_C
Viral_helicase1
NB-ARC
AAA_7
NACHT
TsaE
IstB_IS21
DUF815
Zeta_toxin
Vps4_C
AAA_24
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
105161369
NCBI-ProteinID:
XP_011077329
UniProt:
A0A6I9T9Q8
LinkDB
All DBs
Position
LG5:289684..294213
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVSMHPETMEKLQLFXGD
TILIKGKKRKDTVCIALADDNCDEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
DDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIREDIEKDIERERRRREN
PEAMEEDNEDEVAEIKAAHLEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAE
NSNAAATGSDPFATSSGAADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccaagcagagtcctctgattctaagggtacgaagagggactttagtacggcg
attctggagaggaaaaaggcgcctaatcgacttgtagtggatgaggcgatcaacgatgat
aactctgtggtttcaatgcaccctgaaactatggaaaagctccagcttttcncgggggac
accatcttgatcaagggtaaaaaaaggaaggacacagtttgcattgcacttgctgatgat
aactgtgatgaaccaaagatccgaatgaacaaggttgtcagaaacaaccttagggttaga
ctaggagacgtggtttctgtgcatcaatgtcctgacgtgaagtacggaaagcgcgtccac
attcttcctgttgatgacacagttgaaggggttactggaaacctttttgatgcttacctg
aaaccatattttcttgaggcctaccgacctgtgaggaaaggtgatctgtttcttgtgagg
ggaggaatgagaagcgtggagttcaaggtgattgagactgatccagctgagtactgtgtt
gttgctcctgatactgagatcttctgtgaaggagagccggtaaaaagggaggatgaggac
aggctggatgaggttggatatgatgatgtcggtggtgtacgtaaacagatggctcagatc
cgggagttggtagagctacctctaaggcacccacagcttttcaagtcaattggtgtcaag
cctccaaaaggaatactgctttatggtcctccgggatctgggaagaccttaattgcccga
gccgtggccaatgaaactggtgctttcttcttctgtattaatggacctgagattatgtct
aaactggcaggagaaagtgaaagcaaccttaggaaggcattcgaggaagccgagaagaat
gcaccatctattatatttatcgatgaaattgactcaattgctcccaagagagagaaaacc
catggggaggttgagaggagaattgtttcccaactcttgacgttaatggatggactcaaa
gctcgtgcccacgttattgtaattggtgccacaaaccgtcccaatagcattgaccctgcc
ctgagaaggtttgggagatttgatagggaaatagacattggtgttcctgatgaagtaggc
cgtcttgaagttcttcgtatccataccaagaacatgaaacttgctgaagatgttgatttg
gaaagaattgccaaggatacacatggctatgttggtgccgacttagctgctttatgcact
gaggctgcacttcaatgcatcagggagaagatggatgtgattgacttggaagatgataca
attgatgcagaaattctgaactccatggctgttaccaatgagcacttccagactgctctt
ggaactagcaatccctctgctctacgtgaaactgtggttgaagtgccgaatgttagctgg
gacgacattggaggccttgagaatgtcaagcgagagctccaagagacggtccaatatcct
gtggagcatcctgagaagtttgaaaagtttggcatgtctccatcaaagggagttcttttc
tatggtcctcctggatgtggaaagactttgttggccaaagctatcgccaacgaatgccag
gcaaactttatcagtgtgaaggggcctgaattgctcacaatgtggtttggagagagtgag
gccaatgtcagagaaatcttcgacaaggcccgccagtctgctccttgtgtcctatttttt
gatgagttggactcaattgcgactcagaggggaagcagcgtaggagatgctggtggtgct
gctgaccgtgtgttgaaccaacttctgacagaaatggatggcatgaacgcaaagaaaact
gttttcattattggtgccaccaacaggcctgatataattgatcctgcacttctccgtcct
ggtcgtcttgatcaattgatttacatccctcttcctgatgaggactcacgccatcaaatt
ttcaaggcatgcttgagaaagtcgccgatttccaaagatgttgacctaagagctctcgca
aagtacactcaaggtttcagtggtgctgacatcacagaaatttgccaacgtgcatgcaaa
tacgctatcagagaggacattgaaaaagacattgagagggagagaagacgacgggagaac
cctgaggccatggaggaagacaatgaagacgaggtagcagagatcaaggctgctcatctt
gaagaatcaatgaagtatgcccggagaagtgtaagtgatgctgacatacgcaagtaccag
gcatttgctcagacattacagcagtcaagaggatttggctctgagttccgatttgctgag
aatagcaatgctgctgcaactggatccgatccttttgcaacgtcttcaggtgcagctgat
gaagatgacctttatagttaa
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