Sesamum indicum (sesame): 105161400
Help
Entry
105161400 CDS
T04135
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105161400
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105161400
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Helicases
105161400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ParD_antitoxin
T4SS-DNA_transf
AAA_19
UTP25_NTPase-like
P-loop_SecA
SLAM
Motif
Other DBs
NCBI-GeneID:
105161400
NCBI-ProteinID:
XP_011077371
UniProt:
A0A6I9T9U6
LinkDB
All DBs
Position
LG5:470745..476767
Genome browser
AA seq
530 aa
AA seq
DB search
MEKDTSFLFSGITFNRKKFAGDFARFKEKTESDDVVEKPNLIENGVSTMEEGMALRADKK
RKRKVARSDPIEGFSVFKRSKSKAVDEAGEHNEDEILQEKKEYYRQLERDALFRKRYNIH
VSGSNIPSPLQNFTELKSRYNCKSYLLHNLSDLGFKEPTPIQRQAIPVLLSGRECFACAP
TGSGKTFAFVCPILMKLKHASKDGVRAVILCPTRELAAQTARECKKLAKGKKFYIKLMTK
QLAKSADFSKLPCDILISTPFRIQFAIRKRKLDLSKVEVLVLDESDKLFELGLVEQVDAV
VKACSNPSILRSLFSATLPDTVEELARTIMHDAVRVIIGRKNSASESIKQKLIFVGSEEG
KLLALRQSFAESLNPPVLLFVQNKERAKELYNELKYDDIRADVIHADLPQIQREHAVDNF
RSGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITLYTE
ADVPFLRNVANVMTASGCEVPEWILSLPKKKWRKHRPQRESISTKSQDEN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacacgtcttttcttttttccggcatcactttcaatcgcaaaaagtttgct
ggtgatttcgcgagattcaaggagaaaacagagagtgatgatgttgtagaaaagcccaac
ttgattgaaaatggggtttctactatggaggagggaatggcgttgcgtgctgataagaag
aggaagagaaaagtggctcgttcagacccaattgaaggattcagtgtatttaaaagatca
aaatcaaaagctgttgatgaagcaggagagcataatgaagatgaaattttacaagagaag
aaggaatattatcggcagttggagagggatgctcttttccggaagaggtataatattcat
gtttctgggagcaatatcccgtctccacttcagaactttacagagttgaaatcgaggtac
aattgcaaatcttacctgttgcacaatttgagtgatctgggttttaaggagccaacacca
atccaaaggcaggctattccagtcttactatctggaagggagtgtttcgcctgtgctcct
actggttctggaaaaacctttgcattcgtctgcccaatacttatgaaacttaagcatgct
tcaaaagatggtgttcgggcagtgattctttgccctacacgtgaattagctgcccagacc
gcgagagaatgcaagaaattggccaaaggaaagaagttttacatcaaattaatgactaag
cagcttgccaaaagtgcagatttctcaaaactgccctgtgatattctcatctccactccg
ttccggatacagtttgcgatccgcaaaagaaaacttgatttaagcaaggttgaagttctt
gtcctggatgaatccgacaaactttttgagttaggattggttgagcaggttgatgctgtg
gtcaaagcatgctcaaacccttccatcctgcgctcattgttcagtgctactttacctgat
actgttgaagaacttgcacgtacaattatgcatgacgctgtccgtgttatcattggcaga
aaaaactctgcttctgagtcaataaagcaaaagctcatatttgtaggaagcgaggagggg
aagcttcttgctcttcgtcaaagctttgcagagagtttgaacccaccggtgctgcttttt
gtccaaaacaaggagcgagctaaggaactgtacaacgaactgaaatatgatgacattaga
gctgatgtcatacatgctgaccttccccaaatacagagagaacatgctgttgataacttt
cgatctgggaaaacttgggttttgatcgccactgatgttattgctcggggcatggacttc
aaaggtgtcaattgtgtgatcaactatgattttccagattctgctgctgcatacattcac
aggattggtcgttctggcagagctgggaggagtggggaggcaataacattatacactgaa
gcagatgttccgtttttgaggaatgtagccaatgtcatgacagcttctggctgcgaggtg
cctgaatggatcttgtccctacccaagaaaaaatggaggaaacataggcctcaaagggaa
tccatctctacgaaatctcaagatgagaattga
DBGET
integrated database retrieval system
