Sesamum indicum (sesame): 105161662
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Entry
105161662 CDS
T04135
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105161662
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105161662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105161662
NCBI-ProteinID:
XP_011077735
UniProt:
A0A6I9T426
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Position
LG5:complement(2048760..2054203)
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AA seq
464 aa
AA seq
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MASIHPPIDNGAVAAEPADPTSVAAEQLAAAEAAETKGDDADTASAETQAASVYVKDKGS
EEMRAKWPGWPGYSVFRLVVPVLKVGGIIGRKGDLIKKLVEETRARVRVLDGPLTSPDRI
VLISGKEDPEAALPPAMDAILRIFRRVNGLSENDGDGKGIGAAGTAFCLIRLLVASTQAI
SLIGKQGSLIKSIQESTGASVRVLSNDELPVYASSEERIVELQGEAVKVLKALEAVVGHL
RKFLVDHSVLPLFEKSYNAPATQERQVDAWSEKTLLHANPQTSLGADYSASVKRDSLFLD
RDSQMESRITSSRLSLYGPEHGLGSRSSTIGHSGGPVVTQIAQTMQIPLAYAEDIIGVQG
TNIDYIRRTSGAILTVQESRGLPEEITVEIKGTSSQVQAAQQLIQEFIGGHREPLPRNYG
KLESSLRPSYSHMGSSSYSSSSFAEQPYGGYGSSGVGGYSSFRL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatccacccacccatagataacggcgcagtggccgcggaacccgccgaccca
acatccgtggccgcggaacaactagcagcagctgaagccgccgaaaccaaaggcgacgac
gccgacaccgcctcggctgagactcaagctgcgtcggtttatgtgaaggataaagggtcg
gaggagatgagggccaagtggccgggttggccggggtactcagtgtttcggttagtagtg
ccggtattgaaagtaggcggcattattggacggaagggagatcttatcaagaagctcgtt
gaggagacacgggctagggttcgcgtgcttgatggccctttaacttctccggatcgcatt
gttttaatatctgggaaggaagatccagaagcagcattgcctccagctatggatgctata
ctaagaatcttcagacgtgtcaatggactgtctgagaatgatggagatggcaaaggcatt
ggtgctgctggaactgcattttgtttgattcggttattggtggcatctacacaggccatt
agtttaataggaaaacagggttccttgatcaagtctattcaggaaagcactggtgcttct
gtccgcgtgctttctaatgatgaattaccagtttatgccagttctgaagaaaggattgtc
gagttacaaggagaagctgtcaaagtacttaaagctttggaagctgtggtggggcacttg
agaaaatttttggtggatcatagtgttcttccattgtttgagaagagttataatgcacca
gctactcaggaaaggcaagtagacgcatggtccgagaagacattgctgcatgctaatccg
cagacctcgctaggggctgattattctgcttcagtgaagagggattcactttttcttgac
cgtgacagccagatggaatctcgtattacgtcttcaagactatcattgtatggaccagaa
catggacttggcagtcgttcttcaacaataggacattctgggggacctgttgtaactcag
attgcacagaccatgcaaatacctcttgcttatgcagaggatattattggggttcaggga
acaaatattgattacattcgacgtaccagtggtgctattcttactgtgcaagagagtaga
ggactacccgaggagattaccgtggaaataaaaggcacctcttcacaagtgcaagcagct
cagcaacttattcaggaattcatcggtggtcacagagagccgctcccgcggaactatggc
aaactggagtccagtttgaggccttcctactctcacatgggcagcagctcatactcatct
tcatcatttgcagaacaaccttatggtgggtatggatcatctggtgttggaggatatagc
agctttaggctttga
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