Sesamum indicum (sesame): 105161850
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Entry
105161850 CDS
T04135
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105161850
03083 Polycomb repressive complex
105161850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105161850
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105161850
Histone modification proteins
HAT complexes
HATB complex
105161850
HDAC complexes
Sin3A-HDAC complex
105161850
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105161850
PRC2.2
105161850
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105161850
Heterochromatin formation proteins
Other heterochromatin formation proteins
105161850
Chromatin remodeling factors
NuRD complex
105161850
NuRF complex
105161850
NuRF complex (fruit fly)
105161850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_HPS5
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
DUF6525
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
105161850
NCBI-ProteinID:
XP_011077979
UniProt:
A0A6I9TBE3
LinkDB
All DBs
Position
LG5:complement(3303118..3310836)
Genome browser
AA seq
494 aa
AA seq
DB search
METTPPPSEPRKRGRPKGSTKAKADKDKEPGGGGASSKMRGSGGERRNTATDESYAHWKQ
LVPVLYDWLASHNLVWPSLSCRWGPVLERGTYKNKQRLYLSEQTDHTQPNTLIIANCEVV
KPRVAAENHIANFNEDARSPYVKKYKTILHPGEVNRIRELPQNKNIVATHTDCPEVLIWD
VEAQPNRHALLGAADSRPDLVLTGHQDNAEFALAMCPAEPFVLSGGKDKSVVLWSIQDHV
STLAADTTQSAEAASSIVKAADNSTVGPRGVFEGHSDTVEDVQFCPSSSQQFCSVGDDSC
LILWDARIGNNPVVKVEKAHNADLHCVDWNSHDENYILTGSADHTVCMFDRRNLTSNGVG
LPVHKFEGHKAAVLCVQWSPDKRSVFGSSAEDGLLNIWDYEKIGQKEEMGSKSPSTPAGL
FFQHAGHRDKVVDFHWNAYDPWTIVSVSDDGEFSGGGGTLQLWRMTDLLYRPKEEVLAEL
QKFKDHVIECSKTS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagacgactccaccaccgagcgaaccaaggaagcgtggcaggccgaagggatccacc
aaggcaaaagccgacaaggacaaagagcccggcggcggcggagcttcctccaaaatgaga
ggttctgggggcgagaggaggaacacagctactgacgagagttacgcgcactggaagcag
ctagtgcccgtgctttacgactggcttgcttctcataacttggtttggccgtctctctct
tgtcgttggggtccagttcttgagagaggaacttacaagaacaaacaacggctttacctt
tctgagcagactgatcatactcagccaaacactttgattatagcaaattgcgaggttgtc
aagccgcgggttgctgcagaaaatcatattgctaatttcaatgaagatgctcgttcgcca
tatgtcaagaagtacaaaactatcttacacccaggagaggtcaacagaatcagggaattg
cctcagaataagaatatagtggcaacacacaccgactgtcctgaagttcttatttgggat
gttgaggcacaacccaaccgacatgctcttcttggagctgcagattctcgtccagatttg
gttttaactggacaccaagataatgcagaatttgcccttgcaatgtgcccagctgaacct
tttgtgctttctggagggaaggataaatctgtggttttatggagtattcaggatcatgtt
tcaacactggctgcagatacaacgcaatctgcagaagctgctagttcaattgtaaaagct
gctgataattctactgttggcccacgtggagtttttgaaggccacagtgatactgttgag
gatgtgcaattttgcccatcaagttcacagcaattttgtagtgttggagatgattcttgc
ttgatactatgggatgccaggatcggaaacaatccagttgtaaaggttgaaaaggcacat
aacgcggatcttcattgtgtagattggaattctcatgatgaaaattatattttgactggt
tctgcggatcatacagtctgcatgtttgatcgccggaatctaacctccaatggagttgga
ttgcctgtccataaatttgaaggtcataaggctgcggttctctgtgtccagtggtctcct
gacaagcgctctgtgtttgggagctcagcagaagatggtttgttgaacatctgggactat
gagaagattgggcagaaggaagaaatggggtccaagtctcctagtactccagcagggttg
tttttccaacatgctgggcacagggataaggttgtcgacttccactggaatgcatatgat
ccatggacaatcgttagtgtctccgatgatggagaattttctggtggcggtggtaccttg
cagctttggcgtatgactgacctgttatacaggccaaaggaggaagttttggctgagctt
caaaaattcaaagaccatgtgattgagtgctccaagacttcttga
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