Sesamum indicum (sesame): 105161913
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Entry
105161913 CDS
T04135
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105161913
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105161913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_14
TPR_16
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_9
ARM_TT21_N
TPR_MalT
ANAPC3
TPR_10
TPR_Slam
ARM_TT21_C
Coatomer_E
RPN7
ARM_TT21_5th
Fis1_TPR_C
TPR-S
NatA_aux_su
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
105161913
NCBI-ProteinID:
XP_011078071
UniProt:
A0A6I9T337
LinkDB
All DBs
Position
LG5:3746034..3762887
Genome browser
AA seq
1115 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEDYFIQATKYYNKA
SRIDMHEPSTWIGKGQLLLAKGDVEQAFNAFKIVLDGDRDNVPALLGQACVHFSRGRYSD
ALELYKRALQVYPLAPSVRVGVALCYYKLGRFEKAKQAFHRVLQLDPENVEALVALGISD
LQTNEAAFIQGGMEKMHKAFEIYPYCAMPLNYLANHFFFTGQHFLVEQLTETALAVTMHG
PTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNPHEFVLPYYGLGQVQLKLGDLRSA
LTNFEKVLEVLPENCDTLKALGHIYVQLEQNEKAQELFKKATKIDPRDPQAFLDLGDLLI
STDIGAALDAYKTARNLLKRGNEEVPLDLLNNIGALHFERGEFELAGEMFKEALGEGIWC
NLFGAEEESILHMAQTNAEGETPGHEVRQSQNRRVNLINSAQYPVDASSSIHQYKDLQLF
HRLEEQGLSVELPWNKVSTLFNLARVLEHMHQTESANILYRLILFKYPDYTDAYLRLAAI
AKARNNVQISLELIGDALKVDEKCADGLLMLGDLELKNDDWVKAKETFRAAKDSTDEKDS
YAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANGAGMVFAER
GQFDIAKDLFTQVQEAASGSSDVEMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYHNT
DSQVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDVGVTLQKFSASTLQKTKRT
VDEVRATVAELKNAVRLFSLLSAASNLQFHGFDEKKIETHVAYCKHLLEAATVHCELAER
EERQNMQRLEVMRQMELADESRRKAEEQRKYQMEKRKQEDELKQVMQQEKHLERIKEQWK
SSSSASKRKDKPQTEDEEGGASEKRRRRGGKRRKKDKRSRYESEEAEAEVDDQEEMEYDD
TNMGYREQYNDANDNEDKDGDIPQDVLAATGLEDSDAEDDAAAPSNTNRRRRAWSESDED
EEPLQRQPEADHETDMQVSDGEANGASAGAGDDEE
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgtatacataccggtgcagaattcagaggaggaggtgagggtggcgcttgat
caacttccccgggatgccaccgacattctcgacattctaaaggctgagcaagctccattg
gatctctggctcatcatcgccagggagtacttcaaacaaggaaaaattgaacaatttaga
cagatattagaagaaggatccagtccagaaattgatgaatattacgcagatgtaagatac
gaaaggattgccattctaaatgctttgggcgcatattatagctaccttgggaaaattgag
actaaacaaagagaaaaagaagactactttatacaggccacaaagtactataataaggca
tcaagaattgatatgcacgagccttcaacctggattgggaaagggcagctgttacttgcc
aagggtgatgttgaacaggcatttaatgccttcaagattgtattagatggagatcgtgat
aatgttcctgctcttctcggtcaggcatgtgttcactttagccgtggacgatattctgat
gcgctggagttatacaagagagccttgcaagtgtatcctttggctccttctgtaagagtt
ggagtagctctctgctactataaattgggtcgttttgaaaaggcaaagcaagcatttcat
cgtgttctacagttagatccagagaatgttgaagcacttgtggcacttggaatttcagat
ttgcaaactaatgaagctgcttttattcagggtgggatggaaaagatgcataaagctttc
gagatttatccttattgtgcaatgccgctaaattatcttgccaatcatttcttcttcact
ggtcaacatttcctagttgagcaactgactgaaactgcacttgctgtaactatgcatggc
ccaacaaaggcacattcttactacaatctagctcgatcttaccacagcaagggggactat
gaaaaggcgggaatgtactatatggcatctgtaaaagaaagcaataacccacacgaattt
gtattaccttattatggtttgggtcaggtccaactcaaactaggagatctacgaagtgcc
ttgaccaattttgaaaaagtcttggaggttctgccagaaaattgtgatacattgaaagct
cttggacacatttatgttcagcttgagcagaatgagaaggcccaagaactatttaaaaaa
gccaccaaaattgatcctcgagatcctcaggcatttctggaccttggtgacttgctaatt
tcaacagacattggtgctgctttagatgcctataaaactgcacgtaatctgctgaaaaga
gggaatgaggaagtacctctagatctgcttaacaatattggtgccctccattttgaaagg
ggagagtttgagcttgctggggagatgtttaaagaagctctgggagagggcatatggtgc
aacctttttggtgctgaagaagaatccattcttcacatggcacaaacaaatgctgaagga
gaaactccaggtcatgaagtgcgacaaagtcaaaatcgcagggttaatttaataaatagc
gcacagtatccagttgatgctagctcaagcatccatcaatacaaggacctacagttattt
catcggcttgaggaacagggtttatcagtggaacttccatggaataaagtttcaacatta
tttaatttagcacgagtcttggagcacatgcatcagactgaatcagccaatatcttatac
cgcctgatcttatttaagtatccagactacacagatgcttatctgaggcttgctgccatt
gcaaaagctcgcaacaatgttcaaattagcctcgaactgattggtgatgcactaaaggta
gacgagaagtgtgctgatggtttattaatgcttggtgacttggagcttaagaatgatgac
tgggtcaaggcaaaagaaactttccgggccgcgaaggactcaactgatgaaaaagattct
tatgcagcagtttgtctgggtaattggaactactttgctgcaaatcgcaacgaaaaaaga
gctcctaagttggaagctacacattatgagaaggccaaggaactgtatacaaaagttctg
ctgcagcaatctgccaacctctatgcggcaaatggtgctggtatggtatttgcagagaga
ggccaatttgatatagctaaggatctttttactcaggttcaagaagctgcaagtggaagt
tctgacgtcgagatgccagatgtgtggatcaacctggctcatgttcactttgctcaaggg
aatttcgctttagctgtgaaaatgtaccaaaactgtttgcgcaagttctaccataatacc
gacagtcaagtgcttctctacttagcacggacacattatgaagctgaacagtggcaagac
tgtaaaaagactttactgagagctatccacttggctccttcaaattacacattgaggttt
gatgttggagttactctacagaagttctcagcatcaacacttcaaaagacaaaaaggact
gtggatgaggtgcgcgctactgtagcagagctcaagaatgctgttcgtctgttcagcttg
ttgtctgcagcttcaaaccttcagtttcatggttttgatgagaagaaaatcgaaactcat
gttgcatattgtaagcacttgctggaagcagcaactgtccattgtgagctagctgagcgt
gaagaaagacagaatatgcaacgattggaagttatgcgtcagatggagttggctgacgaa
tcccgcagaaaggcggaagagcagagaaaatatcagatggagaaaaggaaacaagaagat
gagttaaagcaagttatgcaacaagagaaacatttggagcgcatcaaggaacaatggaag
agtagctcttctgcttcaaagcggaaagacaaaccccagactgaagatgaggagggtggg
gctagtgaaaagaggaggagaagggggggaaagcggaggaagaaggataagagatcacgc
tatgaatcggaggaagccgaagctgaagtggatgatcaagaggaaatggagtatgatgac
accaatatgggctacagggagcagtataatgatgcaaatgacaatgaagataaagacggc
gacattccccaagatgttcttgcagcaactggcctggaagattctgacgccgaggatgat
gcagctgcaccttcaaatacaaatcgacgaagaagggcttggtcagaatcagatgaagat
gaggagccattgcagaggcaaccagaggccgatcacgagactgatatgcaggtgagtgac
ggagaagcaaatggggccagtgctggtgccggtgatgatgaagagtga
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integrated database retrieval system
