Sesamum indicum (sesame): 105161947
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Entry
105161947 CDS
T04135
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105161947
03041 Spliceosome [BR:
sind03041
]
105161947
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105161947
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105161947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
105161947
NCBI-ProteinID:
XP_011078128
UniProt:
A0A6I9T377
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Position
LG5:3989522..3996445
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AA seq
404 aa
AA seq
DB search
MMQQQRLKQQQALMQQSLYHPGLLAPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTE
LLLQEVFSSAGPLEGCKLIRKDKSSYGFVDYFDRQSAALSILTLNGRNLFGQPIKVNWAY
AGIQREATSTHFNIFVGDLSPEVTDATLFACFSMYPTCSDARVMWDQKTGRSRGFGFVSF
RNKLDAQSAINDMNGKWLGTRQIRCNWATKGAGLGDDQQSSDSKNIVELTNGSSEDGQEK
RKEDGPENNPQYTTVYVGNLAPEVTLVDLHRHFHALGAGTIEDVRIQRDKGFGFIRYSSH
AEAAHAIKIGNARIFFGKPIKCSWGSKPTPPGTSSAPLPPPAAAHMPGLSAADLAAYGRQ
LALSKLGAQPLIYPQGQRLGTATQAIYDGGFSSITTSQPPMYYQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcagaggttgaagcagcagcaagcactgatgcagcaatcgctttaccat
ccgggtcttctagcacctcctcagatagagcctatcttaagtggaaacttgcctcctgga
tttgattcaagttcttgccgcagtgtctatgttggcaatattcacccacaagttacagaa
cttcttcttcaagaggttttctctagtgctggtcctcttgaaggttgcaagcttattcga
aaagacaagtcatcgtatggttttgtggactactttgatcgtcaatcagctgccctttct
attttgacccttaatgggaggaatttgtttggacagcctataaaagttaactgggcatat
gctggtattcagagggaggccacatcaacacatttcaacattttcgtcggtgatcttagc
ccagaggttacggatgctaccttatttgcatgcttctctatgtatcctacttgctcagat
gcaagggtcatgtgggatcagaagactggccgttccaggggtttcggttttgtatctttc
cgcaataagctggatgctcaaagtgcaattaatgatatgaatgggaagtggcttggaaca
aggcaaattcgttgcaattgggctacaaaaggtgctggtttaggcgatgaccagcagagt
tccgattcaaaaaacattgtggaattaacaaacggatcatcagaggatggtcaagaaaag
aggaaagaagatggtccagaaaataatccgcagtatactaccgtctatgttggcaatctt
gcccctgaagtcacattagttgatctccatcgtcatttccatgcacttggagctggaaca
attgaagatgtccgtattcaacgagacaaaggatttggcttcataaggtacagcagccat
gctgaagcagctcatgccatcaagatcggaaatgcccgaatcttttttggcaaaccaatt
aagtgctcatggggtagtaagcctactcccccaggaaccagttctgcccctttacctcca
ccagccgcagctcatatgccaggtttgtcagccgctgatcttgctgcatatggaaggcag
cttgctttgagtaaacttggtgctcaacctcttatatatccacaaggtcagcgtcttggt
actgctactcaggcaatatatgatggtggattttcgagcatcaccacaagccagccacct
atgtattaccagtaa
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