Sesamum indicum (sesame): 105162015
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Entry
105162015 CDS
T04135
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105162015
03460 Fanconi anemia pathway
105162015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105162015
03400 DNA repair and recombination proteins [BR:
sind03400
]
105162015
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105162015
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105162015
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105162015
Bloom's syndrome complex (BTR)
105162015
FA (Fanconi anemia) pathway
105162015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF7093
DUF3175
AROS
Motif
Other DBs
NCBI-GeneID:
105162015
NCBI-ProteinID:
XP_020549636
UniProt:
A0A8M8V0E0
LinkDB
All DBs
Position
LG5:4562622..4572043
Genome browser
AA seq
720 aa
AA seq
DB search
MSKSPLPLQNVCGSGKQVIKKEALVKILRWHFGHSDFRGKQLEAIQAVLSGRDCFCLMPT
GGGKSMCYQIPALAKQGIVLVVSPLIALMENQVAALKEKGIAAEYLSSTLTVKAKNKIYE
DLESGKPALRLLYVTPELIATPGFMAKLTKIHGRGLLNLIAIDEAHCVSTWGHDFRPSYR
KLSLLRNRLPCIPVLALTATAVPKVQEDVIESLSLQNPLVLKSSFNRPNIYYEVRYKDLL
DDPYTDLCNYLKSYGKVCAIVYCLERTACDDLAVHLTKNGISCAAYHAGLNSKLRSSVLD
NWISSKTQVVVATVAFGLGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYY
GVDDRRRMEFILGTAASKKLNSSSMEEGSSRKALANFRQMIEYCEESGCRRKKILESFGE
EVATSLCAKSCDACKHPNVVSKNLEELTSIATFRHRNGSSRIYISSGSDFNDDAQFSEFW
NRDDEATGSEEDISDSDDPTEIAKSVAHSSRSSEWRLRERMESLQRAEENYYRSKSNQEK
QVNKVDKNSISGTLRESGKQRLLNAMKQNLHRFSNLQIDSLTSAETLETECYKKYEKSGK
SFYLSQIASTVRWLSTATPDELTNRVGTATSTPPEAVRPAPSCSSPSSSSFNLVINQADE
EKVSSSIKSNSPVSQDTAPPPILSFSEFINRRKSTDNKVSTSKRPLSDGVSRGTEKKTKS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaccgttaccactgcaaaatgtgtgcgggtcggggaagcaggtgatcaag
aaggaagctttggtgaagattttgcggtggcattttggacattctgatttccgggggaag
cagttggaagccattcaagctgttttatctggtagagattgtttttgtctgatgccgact
ggtggagggaagtcgatgtgttatcaaattccagctctagcaaaacaggggattgtgctc
gttgttagtcctttgatagcccttatggaaaatcaagtagcggcactgaaagaaaaaggg
atcgctgctgaatatctctcttcaaccctgaccgtaaaagccaagaataagatttatgaa
gaccttgaatcgggaaagcctgctttgaggttactgtatgttacaccagaactgattgca
acaccagggtttatggcgaaactgacgaagattcatggcagggggttgctaaatcttatc
gcaattgatgaggcacattgtgtatcaacctggggccatgacttcaggcctagctacaga
aagctttctcttctcaggaaccgcttgccctgcatacccgtcttggctctgacagctact
gctgttcctaaggttcaggaggatgtgatagagtccttgtctctgcaaaacccactggtc
ctgaaatcgtcatttaatcggccaaatatttactatgaagttcgctataaagatctgctg
gatgatccatacactgatctttgtaattatctcaaatcctatggaaaggtttgtgccatt
gtttactgccttgagcgcactgcttgtgatgatctggctgtccacctgactaagaatgga
atttcttgtgctgcatatcatgcaggactgaatagtaaattgcggagctcagttttggat
aattggatctcctcaaaaacgcaagtagttgtggctactgtagcttttgggttaggcata
gatcggaaggatgtcagaattgtttgccattttaatattccaaagtccatggaagccttc
taccaagagtcaggtcgagctggtcgtgatcaattgccctctcgaagtctcttgtattat
ggagtggatgatcgcagaagaatggaatttatcctgggtactgctgcaagcaagaaattg
aattcttcaagcatggaggaagggtcctccaggaaggccctagctaatttccgtcagatg
attgaatactgcgaggagtctggttgccgaaggaaaaagatccttgaaagttttggggaa
gaggtagctacatcactgtgtgcaaaatcttgtgatgcatgcaaacatcctaatgtggtt
tccaagaatttggaggagcttacaagcattgctacatttcgacatagaaatgggtcctca
cggatatacataagcagtggttcagacttcaatgatgacgcacaattctcagaattctgg
aatcgtgatgatgaagcgactggatccgaggaagatatatccgattctgatgatcccact
gaaattgcaaaaagtgtagcacattcgagtagatcatcagaatggagattacgcgaaagg
atggagtcattgcagcgtgcagaagagaactattaccggagtaaaagtaaccaagagaag
caggttaataaagtggacaaaaactccatatctggaacattgcgggagtcggggaagcag
agattattaaacgcaatgaagcaaaacctgcatcgtttcagcaatttacagatcgactcc
ttgacatctgctgagacacttgagacagaatgctacaagaaatatgagaagagcgggaag
tcgttctatttatctcagattgcaagtacagtgaggtggttgtcaaccgcaactcccgat
gaactaacaaacagagtcgggactgctaccagtacaccaccagaggctgttaggccagcc
ccaagttgctcctccccatcatcctcatcgttcaatctggtaatcaatcaagccgatgaa
gaaaaagtcagtagcagcattaagtctaattctcctgtttcccaggatacagcgcctccg
ccaattctttctttctcagagttcatcaacagaagaaaatcgacagataacaaagtctca
acatctaaaaggccattgagtgatggagttagcagaggcacggagaagaaaaccaagtcc
tga
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