Sesamum indicum (sesame): 105162093
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Entry
105162093 CDS
T04135
Name
(RefSeq) polygalacturonase QRT2-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105162093
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105162093
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ACT-like
MRF_C2
Motif
Other DBs
NCBI-GeneID:
105162093
NCBI-ProteinID:
XP_011078321
UniProt:
A0A6I9TCL8
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Position
LG5:complement(5470151..5485126)
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AA seq
408 aa
AA seq
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MDSASGVLLIFLFTSATSLLNAHEIDEDNFNVMDYGATSDDLTDDSQAFLEAWDDACSAS
VESSRVYVPAEKTFVVDPITFHGPCYASTINFAISGRIMAPESPSSWDGGDASQWLGFKN
VNGLKVDGFGFGLIDGQGKGWWDQSCRYHPRLKQCTTLAPTALKFVSCNESSVSNMKFTN
SAQTHILVRGCNSFSIDNVMIESPGNSPNTDGIHIQSSQHVLITNSRIATGDDCVSIGDH
TSNIEIENVECGPGHGISIGSLGRGGNYVQVQNILVTDAFFNGTTNGARIKTWQVGRGYV
RDVTFQNLLFNHVQNPIIIDQNYCNVRNACKEQETGVQISNVNYKEVLGTSTTDIAININ
CSRSVPCFGISMESIQLLSAEVGKQVTANCSNAYGEEVDVVPGPCLLD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcttcgggagtgttgttaatatttcttttcacttcagctacttcactccta
aatgcccatgaaattgatgaagacaatttcaatgtcatggattatggagctacaagtgat
gatcttacagacgattcacaagcatttctggaggcatgggatgatgcgtgcagtgcctca
gttgaatcttcaagagtatatgttccagcggagaagacatttgtagttgatcccatcact
tttcatggcccatgctatgcttcaacaatcaatttcgcaatttcagggagaattatggcc
ccagaatcaccaagctcgtgggatgggggagatgcaagtcaatggttaggatttaagaat
gtgaatgggttaaaggtggatgggttcgggttcgggttgattgatgggcagggcaagggt
tggtgggatcaatcgtgtagataccatcctcgactgaagcaatgcacaacgttggctcca
actgcgttgaagtttgtatcatgcaacgagagcagtgttagcaacatgaaatttacaaac
agtgcccagacgcacatattggtgaggggatgcaacagcttcagcatcgacaatgtgatg
atagagtcccctggaaacagccccaacactgatggcattcacattcaatcatctcaacat
gtgcttatcaccaattccagaattgccactggtgatgattgtgtctccattggtgaccat
acttctaatatcgaaatagagaatgtggaatgtggtcctggccatggtatcagtattgga
agtttaggaagaggagggaattatgtacaagtacaaaatattcttgtaactgatgcgttc
ttcaatggaactacgaacggagctcgaatcaaaacatggcaggtgggaagaggatatgtc
cgagacgtgacatttcaaaatctcctattcaaccatgttcagaatcccataatcattgat
caaaattattgcaacgtgaggaatgcatgcaaagagcaggaaactggagtacagataagc
aatgtaaattataaggaagtgttggggacatccaccacagatattgctattaatatcaac
tgcagcaggtcagtgccatgctttggaatatcaatggaatcaatacaattgttatcagct
gaggttgggaagcaagtcacagcaaattgtagtaatgcctatggtgaagaagttgatgtg
gttcctggtccctgtcttttggactga
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