Sesamum indicum (sesame): 105162107
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Entry
105162107 CDS
T04135
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X2
KO
K08737
DNA mismatch repair protein MSH6
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105162107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105162107
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105162107
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
RT_RNaseH_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
105162107
NCBI-ProteinID:
XP_011078349
UniProt:
A0A6I9T3S4
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All DBs
Position
LG5:complement(5627120..5642594)
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AA seq
1062 aa
AA seq
DB search
MQRQTSILSFLRKPESSSSGKPIVLDASDEEIKGTDTPPEKEPRRVFTDSRPSLFSSIRH
KFEKVDNSKNTESRCKEDNTSTVRSLLLQSDGPEDLSNLYLVPKQHNNQSLLNNSRTMSS
ERDSRNSFLTTSEDDVLGPDTPGTRPLVPRLKRVQEDISNFEDKADFSLPDNKKRTKFLQ
GSDVLKKNGEKDSETISKFEWLHPSRIKDANGRRLMDPLYDKRTLYIPPDALRKMSASQR
QYWNVKCKYMDVVLFFKVGKFYELYELDAEIGHKELDWKITLSGVGKCRQVGVSESGIDD
AVQKLIARGYKIGRMEQLETSEQAKSRGSTSVIQRKLIHVITPATSCEENIGPDAVHLLA
IKEDSLLKNGSISFGFAFVDCAALKFWIGSISDDASCTALGALLMQVSPKEIIYESRGLS
REAHRALKKYTLTGSTPSQLNPWDTFGEASEVRNIIESSRYFNGFSDSWHHISDGAMLGD
LELCALGGLISHLSRLMLNDVIRNGDILSYEVYKGFLRMDGQTLVNLEIFSNNADGGPSG
TLYKYLNNCITSSGKRLLRNWICHPLQDVEKINNRLAVVEELMANPEIMLLIAQSLRKLP
DLERLLGRVKSSFQSSSVILLPLIGQKILKQRVKVFGSLVRGLRIGIEMLMLMQKHGLLS
TSLSRVVSLPMLSGNEGLDQSLAQFEAAIDSDFSNYQDHNVTDLEAETLSILIELFTEKA
TQWSQMIHAINCIDVLRSFAISAVSSCGAMCRPKFTNSFVETMSPTLHLKGLWHPYALGE
NGGLPVPNDIHLGGDGRTHSPCSLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCESCT
LSVVDIIFTRLGAADRIMTGESTFLIECMETASVLRNATQKSLVLLDELGRGTSTFDGYA
IAYAVFRHLVESVNCRLLFATHYHPLTKEFAAHPLVLLQHMACSFDSASKLSSQVDQKLV
FLYRLASGACPESYGMKIALMAGIPSSVVEAASKAGQVMKEMVGESFKSSEQRENFSTLH
EEWLKSVLSLSETAEVDFDNDDAFDSLICLWHELKRSCKEIT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacagacatcaatactttccttcctcaggaaacccgaatcctcttccagtggc
aaacccatcgttctcgatgcttccgatgaagaaattaaaggaaccgacactccacccgag
aaggagccgcgtcgggtattcaccgatagccgcccttcgttattctccagcattaggcac
aagttcgagaaagtcgacaacagtaaaaacacggagtctaggtgcaaagaggataatact
tctactgttcggtctcttctgctgcaatctgacggaccagaagatctgagcaacctatat
ttagtgcccaagcaacacaacaatcaaagcctacttaataatagcagaacaatgagttct
gaaagggatagccggaattcatttctaaccacttctgaggatgatgttcttgggccagac
acaccaggcacgagacctcttgtacctaggttaaagagagtccaggaagatatttctaat
ttcgaggacaaggctgatttttctttaccagataacaagaagagaacaaaatttctgcag
ggttccgatgttttaaagaaaaatggtgagaaggactctgaaacaattagcaagtttgaa
tggctccatccgtctcgaatcaaggatgccaatggaagaaggctaatggaccctctttat
gataagaggacactttacatccctcctgatgctttgagaaaaatgtcagcatctcaaagg
caatattggaatgtcaaatgcaagtatatggatgtggtcctgttctttaaagtgggaaaa
ttctatgagctctatgaattagatgctgaaattggtcacaaggaacttgattggaaaata
acactaagtggtgtggggaagtgtcgacaggttggtgtatctgagagtggaattgatgat
gctgttcagaagttgatagcacgtgggtacaagattggtcggatggaacaattggagaca
tctgagcaagcaaaatctaggggctctacttccgttattcagagaaagttgattcatgta
attactcctgcaacctcatgtgaggaaaatatcgggcctgatgctgtccatcttcttgcc
ataaaggaggattccctgctaaagaatggatcaatttcatttgggtttgcatttgtggat
tgtgctgcattaaaattttggattggttctatcagtgatgatgcttcatgtacagcattg
ggggccttgttgatgcaagtgtcaccaaaggagattatttatgaaagccgagggctgagt
agagaagctcatagagcacttaaaaagtacactttgacaggatcaactccatcccagcta
aatccatgggatacttttggtgaagcctcggaagttagaaatatcattgagtccagtaga
tacttcaatgggttttctgattcctggcatcacatctctgatggagctatgcttggtgat
cttgagttatgtgctctggggggacttattagtcatttatcgagattgatgttaaatgat
gtgattcgcaacggggatattttgtcttatgaagtctataaaggttttctcagaatggat
gggcagacgctggtaaatttggagatcttcagtaataatgctgatggtggtccatcaggc
actctgtacaaatatcttaataattgcataacatcatctggtaagcggctcttaaggaac
tggatatgtcatcctcttcaagatgttgagaaaattaacaacaggcttgctgtggttgag
gagctgatggcaaatccagaaatcatgctactcattgcccaatcgcttcgcaagcttccg
gatttggaaaggttgcttggacgcgtgaagtctagctttcagtcctcttctgtgatattg
ttgcccttaattggccaaaaaatactgaaacagcgagtaaaagtgtttgggtccctcgta
agaggtctgcgaattggaatagaaatgttaatgcttatgcaaaagcatggattgttgagt
acttcgttatccagagttgtatcccttcctatgctaagtggcaacgaggggcttgatcaa
tctcttgctcaatttgaagcagcgatagatagtgacttctccaattaccaggaccataat
gttacagacttggaggctgaaacactatctattctgattgagttgttcactgagaaggcg
acccaatggtctcaaatgatacatgccataaactgcatcgatgtactgagatcttttgct
atttctgcagtctcttcttgtggagcaatgtgtagacctaaattcacaaattcttttgtg
gagactatgtcccctacactgcatttaaaagggctatggcatccttatgcccttggtgag
aatggggggctgcctgttccaaatgatatccaccttggaggagatggaagaactcacagc
ccctgctcattgttattgactgggcctaacatgggtgggaagtcaacccttttacgggcc
acttgtctggctgtgataatggctcagctaggctgttatgtgccttgtgaaagttgcact
ctatcagttgtagacatcatatttactaggcttggcgcagctgatcgaatcatgacaggc
gagagtacctttcttatcgagtgcatggagacagcatcagttttacgaaatgctacacag
aagtcacttgttcttcttgatgaactgggccgagggacaagcacttttgatggatatgct
atagcatatgctgtatttcgtcatcttgttgagtcagtcaactgccgtttgttgtttgct
acacattatcatcctctcacaaaggagttcgctgcccatcctcttgtactactgcagcac
atggcctgctcttttgattctgcatctaaattgtcatctcaagtcgatcagaagctagtt
tttctctaccgactcgcatctggagcatgcccagagagctacgggatgaaaatagcactt
atggctggtatcccaagctcagtggttgaagcagcctcaaaagctggacaagttatgaag
gaaatggttggagaaagtttcaagtcaagcgagcaaagggagaacttctccacgttgcat
gaagagtggttgaaatctgttctatctctttcagagacagcggaggttgacttcgacaat
gatgatgcatttgattccttaatttgcctgtggcatgagctgaaaagatcatgcaaagag
atcacctaa
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