Sesamum indicum (sesame): 105162422
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Entry
105162422 CDS
T04135
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sind03016
]
105162422
Enzymes [BR:
sind01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
105162422
Transfer RNA biogenesis [BR:
sind03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105162422
Prokaryotic type
105162422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
CSF-1
Motif
Other DBs
NCBI-GeneID:
105162422
NCBI-ProteinID:
XP_020549682
UniProt:
A0A8M8UT22
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All DBs
Position
LG5:complement(12126104..12145737)
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AA seq
737 aa
AA seq
DB search
MLTRQLTLSLKRINRIELKPYANLFASVKPFSCRSEGNMTSVEESDVGIVCYISHLPGFR
GILKQRYSDFIVNEVDLDGNVVHLTSLEAPSEIAEEKKDSLVDLLDKDYSPTIESFRALA
GESDAEKLKDFINQIASGVNNHDEFILLSPCSDKSHRAAVHNFFKERLKLFVTDTIDGPD
SVSKSVRVRLNSGSHSGSRRNSKKRKERGDKPYDSRGSDNWPENIGKFLRFHLYKENKDT
QEALGLLGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNEKLIGIKVGNFC
HVNDGLVLGQLQGNRFTITLRSVSAETEDIVKASATALGENGFINYFGLQRFGSSSIPTH
LIGAALLRGEWKAAVSLILDPREGEKDVTRKIREYFKESGDVEGTLRQLPRHLVAERAIL
HCFRKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGFHQVVLGDLVYCKE
QEAEKELPSSHLECKDGSGCDTDVNYHLDDISLTDLSELRNTSVKVITEEDIVAGKYTIY
DIILPLPGSRIIYPMNDIGEVYHELAKKDDISLIDSLHNTKEFSLTNMTGAYRQVFQKPK
DFQWELLNYTDGNKPLAETDWDIISKSCAASFGRDSDEKEQIKLQTGCRSEANKFKNEVV
LSPDTRETKSDREEDIQIDEPIGASKTPESQMALKLSFTLPASSYATMAIRELLKTSTSK
VDLRGVIVSRLFISEGM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaggcaattgacgctctcactgaaaaggattaaccgaatcgaactaaaaccc
tatgccaacctcttcgcctctgtaaaacccttctcgtgccgttcggagggaaacatgact
tccgttgaagaatccgatgttgggattgtctgctacatttctcatctcccaggcttccgt
ggtattctcaagcagagatattcggattttattgtaaatgaagtggatttggatggaaat
gttgtccatttaacctcgctggaggctccatcagagattgcagaggaaaaaaaagacagc
ctagttgatctactggataaggattactcccctaccatagaatcttttagagctcttgct
ggtgaatctgatgcggagaagttgaaagatttcataaatcaaattgcttcaggagttaac
aaccatgacgagtttattcttctttctccgtgctctgataagtcccatcgagcggctgtt
cataacttcttcaaggagagactgaaactctttgtcactgacacaattgatgggccagat
tccgtatcaaagtcggttcgcgtgcgattgaattcaggaagtcatagtggtagcagaagg
aactccaagaaaagaaaagaacgaggtgataaaccatatgattctaggggctcagataat
tggccagaaaacattggcaagtttctcaggtttcatctttacaaagagaacaaagataca
caagaggctcttgggctccttgggaagatgcttggcattcagccaaggtcctttgggttt
gctggcacaaaagataaacgctctgtatccactcaaagggttaccgtttttaagcagcgg
gcaagtagattagcagcacttaatgaaaaattaattggtattaaagtcggaaacttctgc
catgtgaacgacggacttgttcttggccaactccaaggaaaccgattcacaatcacatta
agaagtgttagtgctgaaactgaagatattgttaaagcatctgcaactgccttaggggag
aatggatttatcaactattttggtttacagcggttcggaagcagttctataccaactcat
ctcataggagctgcattactgcgtggagaatggaaagctgctgtcagcttgattctcgac
ccaagagaaggggagaaggatgtcacaagaaagataagggaatacttcaaggagagtggt
gatgttgaagggactctaagacagttaccacgccatctagttgcagaacgtgctattctg
cattgtttccggaaatgtcctggaaattacttacaagctttgctggctatacctcggaca
ttgagaatgatgtttgtgcatagttaccagagctatttatggaaccatgccgcaagtatg
agagtgcaaaaatatgggtttcaccaggttgtgttgggtgatttggtgtactgcaaagaa
caggaggctgagaaagaactgccatcttctcatttggaatgcaaagatggcagcgggtgt
gatacagatgtcaattaccatttggatgacatatctctcactgatctttcagaattaaga
aatacatctgtgaaggtgatcaccgaggaggatatagttgctggaaaatacacaatctat
gatatcatccttcctttacctgggtcgaggataatctatccaatgaatgatatcggggaa
gtctatcatgaattagcaaaaaaggatgatatcagcttgatagacagtctgcataacacc
aaagaattttcattaaccaacatgactggagcatacaggcaggtgtttcaaaagcccaag
gatttccagtgggaattgctcaactacacggatggaaataaaccactggcagagacagat
tgggacattatttccaagtcatgtgcagctagttttggtagagactcagatgagaaggaa
cagatcaagctccaaactggctgtaggtcggaggcaaataagttcaagaatgaggttgtg
ctgtccccagacactagagaaactaaaagtgatagagaagaagatatacaaatagacgaa
cctataggtgcctctaagacaccagaaagccagatggctctcaagttgagctttaccctc
ccagcttcttcttatgcaactatggccataagggagctgctaaagacatcaacctctaaa
gtggatctcaggggtgtgattgtaagcagattatttatttcagaagggatgtaa
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