Sesamum indicum (sesame): 105162436
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Entry
105162436 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105162436
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105162436
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
105162436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Prok-RING_1
zf-Nse
Arc
SAMD1_SHD
Tmpp129
PHD
PHD_NSD
RINGv
Prok-RING_4
zf-RING-like
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
105162436
NCBI-ProteinID:
XP_011078748
UniProt:
A0A6I9T4H6
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Position
LG5:12261024..12262749
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AA seq
390 aa
AA seq
DB search
MKICVAEHHGIMGFVFLVSMLLSPGIVLVGAQSPPDNNGNQYPYARFSPSMAIIIVVLIA
ALFFMGFFSIYIRQCSESSGAAGSVRRALSLRSRRAAAGRGLDASVIETFPTFSYSEVKD
HKIGKGTLECAVCLNEFQEDERLRLLPKCDHVFHPECIDAWLESHVTCPVCRANLVPQPG
DEQVQADAQESTGNDHNVERSNSRNDEIVLQVDENQQPGLTRNLSFEYRNRPPRSWSIKS
FGFGKFRSHSTGHSLVQPGENLERFTLRLPQEVRKEVMDRAMLNRTRSCAVTLPREGSSR
RGYRTNGGEGSNWAGRFYRRIERSDRETKSDRWVLFTRGLSLKSPKVVAETGDGVGSSRT
PVKMPSFKCLEPKAADETSLISDNPGRPPV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttgtgttgcagaacatcatgggatcatgggctttgttttcctcgtctccatg
ttactatcgccgggaatcgttcttgttggagctcagagtccgccggacaacaacggcaat
cagtatccttatgcaaggttcagcccttccatggctataatcatagttgtcctgatagca
gcgctcttcttcatgggcttcttctctatttacatccgccaatgctctgagtcctcaggc
gccgcgggcagcgtccgccgagcactctctttgcgctcccgcagggcggcagctgggcgt
ggtctggatgcatcagtcatagaaaccttccccactttctcgtactcggaggtgaaagac
cacaagatcgggaaggggacgttggagtgtgcggtgtgtttgaacgaatttcaggaggat
gagagactgcgtctgctgcccaagtgcgatcatgtgttccatcccgagtgcatcgatgct
tggctcgagtcccacgtcacctgcccagtttgcagagctaatttggtcccgcagcccggc
gatgagcaggttcaggctgacgcccaggagtcaaccggcaatgatcataacgtggaaaga
agcaattcaagaaacgatgaaattgtgctgcaggttgatgaaaatcagcagccggggctg
acccggaacctgagctttgaataccgaaaccggccgccaagatcttggtctataaaatcg
tttggttttggcaagtttagatcgcactccactggccactcattagtacaaccaggcgaa
aacctcgagcgcttcactctgagattgcctcaagaagtgaggaaggaggtcatggaccgg
gctatgttaaaccgtaccagaagctgcgccgttacgttgccaagggaaggcagttcgaga
agggggtacagaaccaatgggggagagggaagcaactgggccggaaggttttacaggcgc
attgagaggtccgaccgagaaacaaagtcggaccggtgggttctcttcaccagaggttta
tccctgaaatcaccgaaagtggtggccgaaaccggtgatggtgtggggagcagtcggaca
ccggtcaaaatgccatctttcaagtgtttggaacctaaggctgcggatgaaaccagtcta
atctcggataaccctggtaggcctccggtttaa
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