Sesamum indicum (sesame): 105162453
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Entry
105162453 CDS
T04135
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105162453
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105162453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
DUF4523
RRM_10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
105162453
NCBI-ProteinID:
XP_011078771
UniProt:
A0A6I9T4J6
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All DBs
Position
LG5:12445486..12454146
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AA seq
437 aa
AA seq
DB search
MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIASAVSALQF
YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQLHQSAISARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPSLPSEQKGKSSQPGYGDTGMYAHAVGFPQMGNAAAIAAAFGGGLP
PGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGFQA
ELAVHFLKGAMLFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSPTK
MIHISTLPQDVTEEEIITHLEEHGTIVSTKLFEMNGKKQALVLFENEEQATEALVCKHAT
SLSGSTIRISFSQLQTI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccctcaaaagtcattcacgttcgtaatgttggtcatgaaatttctgagaat
gacttgctccagctgttccagccatttggagttatcaccaaacttgtgatgcttcgagcc
aaaaatcaggccctcctccaaatgcaagatatcgcttcagcagtaagtgcattgcaattc
tacactaacgttcagccaagcataaggggaaggaatgtttatgttcaattttcatcacat
caagaactaaccattatggatcaaaatgctcaagcgagaggagatgagcctaacagaatc
ctcttagttacgatacatcacatgctatatcctattactgtggaagtgctgcatcaagtt
ttttctcctcatggatttgtagagaagatcgtcacgtttcagaagtcggctggttttcaa
gctctaattcagtatcaattacaccaaagtgctatttctgcgaggaactcccttcaggga
cgaaatatatatgatggttgctgtcagctggatattcagttctcaaaccttgacgaattg
caagtgaactataataatgaacgctcaagggatttcacaaacccttccttgccttcagaa
caaaagggcaagtcctctcaacctgggtatggagatacaggcatgtatgcccatgcagtt
ggatttccacagatgggcaatgctgctgccatcgcggctgcctttggaggaggtctacca
cccggtataagtggaacaaatgataggtgcacagttcttgtatctaatctgaatcctgat
agaatagacgaggataagcttttcaatttgttctcaatatatgggaacattattagaatc
aaacttctccgaaataaaccagatcatgcattggttcaaatgggagatggttttcaggct
gaattggctgttcactttttgaagggtgctatgttgtttggtaagcgcttggaggtgaac
ttttcaaagcatccaaacattacaactggagctgatacacatgagtactccaactcgaat
ctcaatcgtttcaatcggaacgctgccaaaaattaccggtattgctgttcaccgaccaaa
atgatccacatctccactctcccccaggatgtgactgaagaagaaataataacccacctc
gaagagcatggaacaattgttagtacgaaactctttgagatgaatggaaaaaagcaggct
cttgtcctctttgaaaatgaggagcaggctacagaagcccttgtgtgcaagcatgctaca
tcacttagtggttcaaccattcggatttccttctctcagttgcaaactatatga
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