Sesamum indicum (sesame): 105162469
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Entry
105162469 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105162469
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Other 90S particles
105162469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
UTP6_C
NRDE-2
S1CSD-TOTE-1
Motif
Other DBs
NCBI-GeneID:
105162469
NCBI-ProteinID:
XP_011078793
UniProt:
A0A6I9T4L4
LinkDB
All DBs
Position
LG5:complement(12562793..12582601)
Genome browser
AA seq
1913 aa
AA seq
DB search
MAPPSKKSKPKPNSKNFQTPSKKPAKAKGTHLNRAVSSLQMPVQVEDDVPDFPRGRGSLL
SGEEENEVRALAEKESRADERVLKKRKKEKRAQNRNQSTEDDLGSLFGDGIIGKLPRFAN
KITLKNVSSGMKLWGVIAEVNEKDIVVSLPGGLRGLVRACDAIDPILDDEVKGDVDYSFL
SRIYHEGQLVSCIVLQVEDDRKEIAKRKIWLSLRLSLLHKSLTLDTVQEGMVLSAYAKSI
EDHGFMLHFGLPSFTGFMPKHSQSEKRIIDVSLGQLLQGVVKNIDRARKVVYLSSDLDMV
SRCVTKDLKGISIDLLVPGMMVNAHVQSTLENGIILSFLAYFTGTVDVFNLDKTFPSSNW
KNDYSKNMKFNARILFIDPSSRAVGLTLNPHLVSNKAPSLLVKIGDIFDQSKVVRVDKGS
GLLLEIPTLPVPTPAYVNVADIADKEAGKFDKSFKEGSLVRVRVLGYRHLEGLATGILKT
SAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFASGVKALCPLRHMSEFEIAKPRKKF
QNGVELVFRVLGCKSKRITVTHKKTLVKSKLQILSSYADATDGLVTHGWITKIEKHGCFV
RFYNGVQGFAPRSELGLGPGSDIGSVYHVEQVVKCRVVKCIPASHRINLSFNITPISTSE
SENVKPGSLVSGVVERVTPQTIVVEINTSSHMKGTISPEHLADHNGLAALLMSSIKPGYH
FDQLLVLDVEGNNLVLTAKYSLVKSTEQLPADVSQIRCHSVVHGYICNIIDSGCFVRFIG
RLTGFAPKNKATDDRRSDLSEVFYVGQSVRSNVVDVSNDMSRITLSLKQSLCSSTDASFI
QEYFLLEEKIARLQVLDSEFPGLSWTDGFGIASIIEGKVHEIKDFGVVISFEKYNDVYGF
ISHYQLAGTNVESNSVIRAAVLDVSKIERLVDLSLKPEFINRSKEESSIVQTPKKKRRRE
AHKELEVNQTVSATVEIVKENYLVLSLPAYNLIIGYASATDYNTQKLPPTQFTHGQSVSA
TVMALPTPATGGRLLLLLTSLSDGVETSRSKRAKKNSSYNVGSLIQAEITEIKPLEVRVK
FGSGLHGRIHVTEATDDNSAESPFSNYRIGQTLAARIVAKRSKPENIKGGYGWELSVKPS
LLKGSGEDEWLSSEGFNYSYGQRISGFVYRVDTEWAWLTVSRDVNAQLYILDSSCEPPEL
AEFQKRFYVGKTLTGYVINVNKEKKLLRIILHKPADGFAEIKENDTNHHLMSHIVEGSFV
GGRISKILPGVGGLMVQIDPHHYGKVHFTELKDSWVSNPLTGYQEEQFVKCKVLEINRAV
KSTVHVDLSLRSAPDGSHDLISADSGVHTSIKRLDKITDLHPDMVVRGYVKNISSKGCFI
MLSRKMDAKILLCNLSDSFVENPENEFPVGKLVIGKVLSVEPLSKRVEVTLKTSSESSKL
KSDSTHLNQIVVGDIVSGKIKRVESYGLFIAIDHTNVVGLCHVSELSDDHIDDLQTAFKA
KAKVLKVDKDRNRVSLGMKSSYIKDEGVLRTHSSHSLDFSIDANDSVVLADPMIRQSNSV
CMKSINNEPDSDYHPILADTKSRALVPPLEVPLDEVENLDIEGDVGPDIINVTEADTIED
KNKRRAKKKAREEREQEIRTAEERLLGKDIPKNADXIRSSPNSSFIWIKYMAFMLSLADV
EKARTVAERALRTINIREESEKLNMWVAYFNLENEYGNPPEEAVTKVFQRALQYCDPKKV
HLALLGMYERTEQHILADELLDKMTRKFKHSCKVWLRRIQFLLKQNSDGVQSVVNRALLS
LPRHKHIKFISQTAILEFKCGVPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLGDVDLI
RGLFERAISLSLPPKKMKFLFKKYLEYEKSVGEEERIESVKKKAMEYVENTLA
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggcacccccttcgaagaaatctaaacccaaacccaactccaaaaactttcaaactcca
tccaagaaacctgcgaaagccaaaggaacgcaccttaaccgcgccgtttcttcgttgcaa
atgcctgttcaggtcgaagacgatgtgccagatttcccccgaggtcggggaagtttgtta
agtggagaagaggaaaatgaggtaagggcattagcagagaaggagtctagggcagacgag
agagtgctgaagaaaaggaagaaggagaagagggcgcaaaataggaaccaatccacagag
gatgatttaggttcgctctttggagatggaattattgggaaattgccaaggtttgccaat
aagatcactttaaagaatgtttcatctggcatgaagctatggggtgtaattgctgaagtg
aacgagaaagatattgtagttagtcttccagggggcttaagaggactagttcgcgcatgt
gatgctattgatcccattttggatgatgaagtaaagggggatgttgattatagcttcctt
tcaagaatatatcacgaaggacagcttgtgtcttgcattgtgttgcaagtggaggatgat
agaaaagaaatagcaaaacgaaagatatggctttctttgcgtctttctttgttgcacaaa
agcttaacattggatactgttcaagaaggaatggtgctaagtgcatatgccaaaagcatt
gaggaccatggttttatgcttcacttcggattgccttcctttacaggatttatgccgaaa
cacagccaatctgagaagagaatcattgatgtaagcctgggacagcttttacaaggggtt
gttaaaaatatagatagagctcggaaggtagtctatttgagttccgaccttgacatggta
tcaagatgcgtgaccaaggaccttaagggtatttcaatagatcttctcgttccaggcatg
atggttaatgctcatgtgcagtcaacccttgaaaatggaatcattttatctttccttgct
tactttactggaactgttgatgtattcaatctagataaaacttttccctcttcaaactgg
aagaatgattattccaaaaatatgaagttcaatgctcggatcttgtttattgatccttca
agtagagctgtgggtttaacattgaatcctcacctagtcagcaataaggccccgtctttg
cttgttaagatcggtgatatctttgatcaatctaaagtagtcagggtcgataagggatca
ggccttctgctggaaattcctactttaccagttccaaccccagcttatgtcaatgtagct
gatattgctgacaaggaagctggaaaattcgataagagtttcaaggaaggaagccttgtc
cgtgtcagggtacttggatatagacacttggaagggcttgcaactggtatattgaagact
agcgcctttgaaggttcagttttcacccactctgatgtaaagccaggaatggtggtaaaa
gctaaagtcattgcagttgatagttttggtgctatagtacaatttgcaagtggtgtgaaa
gcgctatgtcctcttcgtcatatgtcagaatttgaaattgcaaagcctcggaaaaaattt
cagaatggagttgagttggtttttcgtgttcttggttgcaaatccaagagaatcactgtt
acacacaagaaaactcttgtaaagtcgaagcttcagattcttagttcttatgccgatgcg
actgatgggctggtcactcatgggtggattacaaagattgagaagcatggatgctttgtt
cggttttacaatggggttcaaggatttgcacccagatctgaacttggtctgggtccaggt
agtgacataggttctgtgtatcatgttgaacaagtggtcaagtgtagagttgtaaaatgt
atacctgcttcccaccgaatcaaccttagtttcaacataacacctataagtacatcagag
agtgagaatgtgaaaccaggcagcttagtctctggagttgttgagcgtgtaacacctcag
acaatagtagtggaaatcaatacctcaagtcacatgaaaggcactatctctcctgaacat
ttggcagaccacaatggtcttgctgctttattgatgtcttccatcaagcctggatatcac
tttgatcaactattggttcttgatgttgaaggaaacaatcttgtacttactgccaagtat
tctctagttaaatcaaccgaacagctcccagctgatgttagccaaatccgttgtcactct
gtggtgcatggctacatatgtaatataattgatagtggctgctttgttcgctttattgga
cgtttaactggttttgctcccaaaaacaaggctactgatgacagaagatcggacctttct
gaggtcttctatgttggacagtctgtccgcagcaacgtagttgatgttagtaatgatatg
agtagaataacattatcattgaagcagtccttgtgctcctcaaccgatgcatcttttatt
caggagtactttcttttggaagagaagattgcgaggctgcaagtattggattctgaattt
ccaggactgagttggactgatggatttggtattgccagtattatcgaaggaaaagtacat
gaaattaaggattttggtgttgttatcagctttgagaaatataatgatgtctatggtttc
atctcacattatcaattggctggaaccaatgtggaaagcaactccgtcatccgtgctgca
gttcttgatgtttcaaagattgaacgccttgtggatctatctttaaaaccagagttcata
aatagatcgaaagaagagagctctattgtacaaactcctaagaagaaacgcagaagggaa
gcccacaaggagttggaagtgaatcaaacagtaagtgccacggtcgagattgtgaaggag
aattatttggttctttcacttcctgcttataatcttattatcggctatgcatcagcaact
gattacaacacccagaaattgcctcctacacaatttacccatggacaaagtgtctctgcc
actgtaatggctcttccaactcctgcaaccggtgggaggttgctgctgctgctcacatcc
ttaagtgatggtgtggagacatccaggtctaagcgggctaagaaaaactctagctataat
gttggatctctcattcaggccgagattactgaaataaagcctcttgaagtcagagtgaaa
ttcggctctggattacatggaagaatacatgtgactgaggcaactgatgacaattctgct
gagagtccttttagtaattacagaattgggcaaacactggcagctaggattgttgcaaag
cgtagtaaaccagaaaacattaaaggaggttatggatgggaattatctgtcaaaccttcc
ttgcttaaaggatctggtgaagatgaatggttgtcttctgaaggtttcaactattcatat
ggacaacgcatttctggttttgtgtatagggttgacactgagtgggcctggctgactgta
tctcgagatgtgaatgctcagttgtatattcttgactcttcatgtgagcctcctgagctt
gcagaatttcagaagcggttttatgtgggcaaaactctgacaggctatgtaataaacgtg
aataaggagaagaagttactacgcatcatcttgcacaaaccagcagatggttttgctgag
atcaaagaaaatgatacaaaccatcatctaatgagccatattgttgaaggtagttttgtg
ggtggcaggatttctaaaattcttcctggtgttggtgggttgatggtccaaattgatccg
caccattatggtaaggttcattttactgaattgaaggattcgtgggtctccaacccactt
acgggttatcaggaagagcagtttgtgaaatgtaaagttctggagattaatcgtgctgtt
aagagcacagttcatgttgacttatctctacgatcagctccagatggttcacatgaccta
atttccgctgacagtggcgtgcatacttctattaaacgtctggacaaaataaccgatctg
catcctgatatggttgtaaggggttatgttaaaaacatctcttcaaaaggatgttttatt
atgctttcacggaagatggatgccaaaattctcctttgtaatttgtcagacagttttgtt
gagaatccagaaaatgagtttcccgtcggcaagcttgtgattggcaaggtgctctcagtg
gagccgttgtctaagcgtgttgaagtaacgcttaagacttcaagtgaaagcagcaagctg
aagtcagactctactcacttaaatcaaattgttgttggagatattgtttctggaaaaatc
aagcgtgtcgagtcttatggcttgtttatagctattgatcacactaatgtggttgggtta
tgccatgtttcagagctgtctgatgatcatatagacgatctacagacagcatttaaagcg
aaggcaaaagttttgaaggtggataaagatagaaatcgagtttctcttgggatgaagtcg
tcatatatcaaagatgaaggagtattgcgtacacattcgtcacatagccttgatttttcc
attgatgccaatgattctgttgtgttagctgacccaatgatacgacagagcaactcagtt
tgtatgaagagcataaataatgagcctgacagtgattatcatcctatactagcagataca
aaatctagggctctcgtgccacctcttgaggttccacttgatgaggtagaaaacttagat
attgaaggtgatgtgggtccagatataataaatgttactgaagccgataccattgaagat
aaaaacaaaaggagggcgaaaaagaaagctagagaagagagggagcaagaaataaggact
gctgaggagaggctgctggggaaagacatcccaaagaatgccgacnttattcgaagttcc
ccaaatagtagcttcatatggataaaatacatggcatttatgctctccttggctgacgta
gagaaggcacggaccgttgctgaaagggcattgagaacgataaatattcgagaagagtct
gagaagctgaatatgtgggttgcttacttcaacttggagaatgaatatggcaatcctccc
gaggaggctgtaacaaaagtattccaaagagcattgcagtattgtgatcccaaaaaggtg
catcttgcccttttgggaatgtatgagagaactgaacaacatatattggctgatgagctt
cttgacaaaatgactagaaagttcaaacattcatgcaaggtctggctgagaaggatccag
tttcttttgaaacaaaacagtgatggagttcagtctgttgtaaatcgtgctctgctcagc
ctcccccgacataagcatataaagtttatttcacaaactgccatccttgagttcaagtgt
ggagttccggataggggaagatccatgtttgagggaatgcttagggagtatcccaagagg
acagatttgtggagcatctatttagatcaggagatccggcttggtgatgtggatttgatc
cgtggattatttgagagggcaataagtttgagccttcccccaaagaagatgaagttccta
tttaagaagtatctcgagtacgaaaagtccgttggtgaagaagagcgaattgagtctgtg
aagaaaaaggcaatggaatatgttgagaatacccttgcttga
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integrated database retrieval system
