Sesamum indicum (sesame): 105162553
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Entry
105162553 CDS
T04135
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105162553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105162553
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105162553
Prokaryotic type
Archaeal type
TFB
105162553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
A2L_zn_ribbon
Zn_ribbon_8
DUF7573
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
105162553
NCBI-ProteinID:
XP_011078912
UniProt:
A0A6I9T9F2
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All DBs
Position
LG5:13172187..13176236
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AA seq
312 aa
AA seq
DB search
MSDTYCTDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG
GPVNPLLGDAALSTVISRGANGSNGDASMARLQNRGGDPDRAIVLAFKTISNMADRLSLV
TTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATKKE
IGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKSGDFDI
RRSPISIAAAIIFMITQLSDSKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEWYAK
DRDLKNLSSPKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacgtattgtacggactgcaagcggaacacggaggtggtgttcgatcatgcg
gcgggggacaccgtgtgctcggagtgtggcctcgtactcgaagcccgctccattgatgag
acctccgagtggagaaccttcgccgatgattcgggcgaccatgacccgaaccgtgtggga
gggcccgtgaacccgctgttgggagatgcggctctttccacggttatttctcggggtgcg
aatgggtcgaatggagatgcgtccatggcccggttgcagaaccggggtggggatcccgac
cgggctattgtcttggccttcaagacaatttctaacatggctgataggttgagccttgta
acaaccattaaggaccgggcaagtgaaatatataaaagattagaagatcaaaaatgtact
aggggaagaaatttggaggctctagtggctgcctgcatttatattgcttgtcggcaggaa
ggcaagcctcgcactgtaaaagaaatatgctctattgttgctggagctacaaaaaaggaa
attggccgagcaaaagagttcatcgtgaaacagttgaaggttgagatgggagaatcaatg
gagatgggtaccatccatgcaggggactatctgaggcgtttctgttctaatcttggcatg
agcaacgaagaggtcaaagctgtccaagaaaccgtccagaagtctggggactttgatatt
aggaggagccctatatctattgctgcagcaatcatttttatgataacccagctatcagat
tcaaagaaacccctccgagatatctcaattgccacaacagtggctgaagggaccatcaag
aatgcttataaggatctctatccccatgctgccaagatcataccagaatggtatgcaaag
gacagggacctcaagaacctttccagccctaaagcctaa
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