Sesamum indicum (sesame): 105162682
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Entry
105162682 CDS
T04135
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105162682
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105162682
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105162682
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105162682
Spliceosome [BR:
sind03041
]
Common components
Common spliceosomal components
SR proteins
105162682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
Motif
Other DBs
NCBI-GeneID:
105162682
NCBI-ProteinID:
XP_011079075
UniProt:
A0A6I9T5D2
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All DBs
Position
LG1:11042084..11045812
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AA seq
232 aa
AA seq
DB search
MADSPRKRYGRSPSPWEENSRSRSRSRSRSKSRSRSRSWSRPRARSRSRSGSRGRGREDA
VNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSVFLVVEPRSRISRGFAFITMDCLEDAN
RCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRGDGYRGDRGRYRGGSSRED
YGYRRSPRRSPYRGGRDYSPRHSPSGGRSRRDRSRSYSPRRSLERNYARGSR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaacgctatgggcggtctccttctccatgggaagagaattca
agatccagatcaaggtcgagatccaggtccaaatctagatctcgttctagatcatggtca
agaccaagggccaggtctaggtccagatcggggtcaaggggccgtggaagggaggatgct
gttaatccagggaatacactctatgtgactggcctatctacgagggtcactgagagagac
cttgaagatcatttctctaaggaaggaaaggtgaaatcagtatttttggtcgtggaaccg
cggtctcgcatctctcggggctttgcttttataactatggactgtcttgaggatgccaat
cgctgtatcaaacacctcaatcaatcagtgttagaaggccggtacataaccgtggagagg
tcgcggaggaagcgcgcaaggacacccactcctggtcattatcttgggctgaaaagtact
cggggtgatggttatcgtggtgatcgtggtaggtatcgtgggggttccagccgtgaagat
tatggctaccggaggtctcctaggcgttcaccttatagggggggacgtgattactctcct
agacattcaccatctggtggaagatcaagaagggacaggtccaggtcatattcgcctcga
cgtagtcttgaaaggaactatgcacgtggttctaggtga
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