Sesamum indicum (sesame): 105162942
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Entry
105162942 CDS
T04135
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105162942
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105162942
Enzymes [BR:
sind01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105162942
Protein phosphatases and associated proteins [BR:
sind01009
]
HAD phosphatases
Fcp/Scp phosphatases
105162942
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105162942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
105162942
NCBI-ProteinID:
XP_011079425
UniProt:
A0A6I9T651
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Position
LG5:18753547..18763810
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AA seq
461 aa
AA seq
DB search
MSLAADSPVHSSSSEDLAAFLDVELDTVSDASADPEEVAEEEEESDDGDGGNYDMDLKRV
KRRKVELSEGINPQSSSSQGEPAKVVGGLLPKKNMCPHPGVYAGMCMRCGQKMDDESGVA
FGYIHKNLRLANDEIARLRDKDLKNLLRHKKLCLVLDLDHTLLNSARLPDITVEEGYLSQ
RDALPDALKSSLFRLDRMQMMTKLRPFVHAFLKEASNLFEMYIYTMGERPYALEMAKLLD
PGDVYFNSRIIAQGDCTQRYQKGLDVVLGQESAVLILDDTEAVWGKHKENLILMERYHFF
ASSCKHFGFNCKSLSELRSDESETDGALATVLKVLQRVHSLFFDPGHKDRLEDRDVRQVL
KTVRKEILEGCKVVFSRVFPTNFPAEEHHLWKMAEQLGATCSLELDPSVTHVVSMDAGTD
KSRWAVQEKKFLVHPRWIEASNYMWQKQPEDSFPVSQAKNK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagcagcggactctccagtacactcgtcaagcagtgaagacttagcagcattt
cttgatgtagagttggatactgtttctgatgcatcagcagatcctgaagaagttgcggaa
gaagaagaggagagtgatgatggtgacgggggcaactatgacatggatcttaagagagtt
aaaaggcgcaaggtggaattgtccgaaggcataaatccacagagttcctcttcccaagga
gaaccagcaaaagttgttggtggcttgttgcccaagaagaatatgtgtccacatcctggt
gtttatgcaggaatgtgcatgcggtgtgggcaaaagatggatgatgagtctggtgttgca
tttgggtacatacataagaatttgaggcttgctaatgatgagatagcccgattacgtgac
aaagacttgaagaacttgctacgtcataagaaactgtgtttggttcttgatttagatcat
acgctgctcaattcagctcggcttcctgatattacagtggaagaaggatacttaagccaa
agagatgctttgccagatgccttaaagagcagcttattcagactggaccggatgcagatg
atgaccaagttgaggccatttgtgcacgcattccttaaagaagctagtaatttgtttgag
atgtacatatacaccatgggtgaacgtccatacgctttagaaatggcaaagctgcttgat
cctggagatgtttactttaattccagaataattgcgcaaggagattgtacgcagaggtat
cagaagggtcttgatgttgttttgggacaagaaagcgcagtcctcatacttgatgataca
gaagcggtgtggggaaagcataaggagaacttaatattaatggaaagatatcacttcttt
gcttcaagttgcaagcactttggtttcaattgtaaatcactttctgaactaagaagtgat
gaaagtgagactgatggagcactggctactgttctcaaagttcttcagcgtgtccacagt
ttgttctttgacccgggacacaaggatcgtctagaggaccgagacgtgagacaggtgcta
aaaacagttcgtaaggaaattttagagggctgcaaagttgtcttcagccgtgtctttcca
accaatttccccgctgaggagcaccacttgtggaaaatggcggagcaactgggagcaaca
tgctcattagaacttgatccatctgttacacatgtggtctctatggatgcaggaacagat
aaatcccgttgggcagtgcaggaaaagaaatttctggtccatcctaggtggattgaggct
tcgaactacatgtggcaaaagcagccggaagacagcttcccggttagccaagcaaagaat
aaatga
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