Sesamum indicum (sesame): 105163049
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Entry
105163049 CDS
T04135
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11797
PH-interacting protein
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105163049
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105163049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
NBCH_WD40
Bromodomain
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
VPS8_N
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Auxin_resp
WD_LRWD1
Agenet
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
105163049
NCBI-ProteinID:
XP_011079558
UniProt:
A0A6I9T6F3
LinkDB
All DBs
Position
LG6:407893..421121
Genome browser
AA seq
1665 aa
AA seq
DB search
MEFRKYTCFGDAPNVGMGTVNLLNKLHTKAQMEAHEEPADCASMDVDLDIREIYFLIMHF
LSAGPCQKTFGQLWVELLEHDLLPRRYHAWYSRSGSVCRDENDDGNSFPLNYDNLAGRYS
HIEKDHLVKLLKQLILTTSPPLRCMVGKVAPAAADVPTLLGTGAFSLLSCERNKVNKQAR
NFPSYLRWPHMQADQVRGLSLREIGGGFSKHHRSPSIRLACYAIAKPSTMVLKMQNMKKL
RGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLSVSSNNAL
VASASNDFTIRVWRLPDGYPISVLRGHSGAVTAIAFNPRANAIYHLLSSSDDGTCRIWDA
RHSQCRPRVYLPKPTEAATGMSSALPSASASSSAASPCHQILCCAFNANGTVFVTGSSDT
FARVWSACKPSIEDPDQPSHEIDILAGHENDVNYVQFSGCAVASRSSPSDSFIEDSIPKF
KNSWFNHDNIVTCSRDGSAIIWVPRSRRYHGKVGRWVRAYHLKVPPPPMPPQPPRGGPRQ
RFLPTPRGVNMIIWSLDNRFVLAAIMDNRICVWNANDGSLVHSLAGHTASTYVLDVHPFN
PRIAMSAGYDGKTILWDIWEGIPIRVYDIGGRFKLVDGKFSQDGTSIVLSDDVGQIYLLN
TGEGESQKDAKYDQFFLGDYRPLTQDTHGNVVDQETQLPPYRRNMQDPLCDSSMLPYPEP
YQSMYQRRRLGALGIEWRPSSIKFAIGTDIGMGPEFHILPLADLDVVLEPLPDYVDAMYW
EPENDGMNDDNDSEYNITEEYFSDEQTCPSDSKLSDSDCSEEKVRRNQKDNMRRSKRKKA
LLEVELMTSSGRRVKKRISDEQEGTSSRSKRYKKSKSGQKNSRRKSTKSKSLRPQRVAAR
NAIHNFSQIEASADEEDEDCSVGDLSDSESSMEGLAIQRRQRGDNLLNEQNICSTSERVS
SDGSEDVVKPLKHPDSLVSVGSKKKLVVRFSLHRRTTPALSENNVGKLKSQGSVASSTLS
GCEEKPEEDRVNPRSGDLGSSSAGVVDKEDYGIQLRDVEERTEVGNELGTSTSGRDANVS
WGKFKIRMSNGTQLGDLVPMNVNAVRPNGCSLIEGEDKPSLSVLTPHPQLNHDSFNKQTF
GIGEKDLPGSDLHGSNSLTVDTKHSLVPENNLRKKLTVKIKSKKFPGDSPSYLQGKTKSD
ATSGAAGESTSKRPSTVEEKPVFGVPMAGNAPDEPNCMPQFHVNGDEVYESDPNVSFHDQ
ETGAESPDMATDSARRARSFRLKATSRDTSRSNRNLETGAEYLQPGTSRSAEKSSKKAID
HFPAEGSRHAGRSRSSRNKRENYYRGDKSSLIEKNMHRMPKKTNWLLLSEQEDGYRYIPQ
LGDEVVYLQQGHQDYLELSKTSQPGPWLRYGDKIGAVEVCLVEDLKYTTHSGSGESCCDI
KLRFIDTSSRVVGQKFQLMLPELDDFPDFIVERTRYEAAMERSWTSRDKCLVWWRDESDQ
GGAWWEGRITAIKDKSSGFPGSPWERYLVKYKNDNTDFRRHSPWELHDPDMSWEQPNIDD
ERKEEILSSLTELMQKASKDKDRHGIIKLNEVAQKLDFMNRFPVPLSPDIIKSRVENNYY
RSLKAMNHDIEVMLSNAESYFQKNTELLRKMKRLSSWFTQNILDL
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaggaaatacacttgttttggtgatgcacctaatgtgggcatgggtacagta
aatcttctgaataagttacacacaaaggctcaaatggaagctcatgaggaacctgcagat
tgtgcttccatggatgtagaccttgacatccgagaaatttattttttgatcatgcatttt
ctatctgctgggccatgccaaaagacatttggacaactctgggtggagcttttagaacac
gacctcttacccagaagatatcatgcttggtattcaagaagtggttcagtctgcagggat
gaaaatgatgatgggaactccttccctctaaattatgacaatttggccggaaggtactct
cacattgaaaaggatcacttggtcaagctgctcaaacagctgatactgacaacatcccct
cctttacggtgtatggtggggaaagttgctccagctgctgctgatgttcctacactactt
ggaactggggccttttctttgttgtcatgtgagagaaataaagtaaataagcaagcgagg
aattttccatcttacctccggtggcctcatatgcaagctgatcaggttcgagggcttagc
ttgagagaaattggaggtggcttttccaaacaccatcgctctccatctatccgccttgca
tgttatgccattgctaaaccatccactatggtgctgaagatgcaaaatatgaagaagtta
agaggacatagggatgctgtgtattgtgcaatatttgatcgctctggtcgctatgtgatt
actggttcggatgaccgtttggtaaagatttggtcaatggaaactgcattttgcctagct
agctgccgtgggcatgaaggcgacattacagatttgtctgtcagttccaataatgcttta
gtggcatcggcatcaaatgacttcactattcgagtttggcgactgccagatgggtaccct
atttcagttcttcgtggacatagcggagctgttactgccattgcctttaatcccagggcg
aatgctatctatcatctcttatcgtcgtctgatgatggaacgtgtcggatttgggatgct
agacactcccagtgccgtcctcgtgtttacctcccaaagcccacagaggccgctactgga
atgagcagtgctttgccttcagctagtgcatcatcaagtgctgcttcaccatgccaccaa
atattgtgttgtgcattcaatgctaatggaactgtctttgttactgggagctctgatact
tttgcaagggtttggagtgcttgtaaacccagtatagaagatcctgaccaaccaagtcat
gaaattgacatactagctggccatgagaatgatgtaaactacgttcagttcagtggctgt
gctgtggcttcgcgatcttctccatctgattcctttattgaggatagcattccgaaattt
aaaaattcctggtttaatcatgacaacattgttacctgttcacgtgatggcagtgcaatt
atttgggtacctagatcaaggagatatcatggtaaggttggacgctgggttcgggcgtat
catcttaaagttcctcctccacctatgccgcctcaaccccctagaggaggtccacgccag
agatttcttccaactcctcgtggtgttaatatgatcatatggagcctggataatcgtttt
gtgctggctgctatcatggataacaggatatgtgtttggaatgctaatgatggtagcttg
gtgcactctttggctggtcatacagcatctacctatgttttggatgtccatccttttaac
ccaagaattgctatgagtgctgggtatgatgggaagactatattgtgggatatatgggag
ggtattcctataagagtgtatgacataggcggacgctttaagctggttgatgggaagttt
tcacaggatggcacatcaatagtgctttcagatgatgtaggacaaatatatctgctaaac
acaggtgaaggggagtcccagaaagacgccaaatatgatcagttcttccttggggattac
cgcccacttacccaggatactcatggcaatgtggttgatcaggagacacaacttccacca
tacaggagaaatatgcaagatccgttgtgtgattcaagcatgcttccgtacccagaacct
taccagagtatgtatcagcgacgtcgacttggcgctctgggaattgagtggcgtccttca
tccataaaatttgctattggcacagatattgggatgggcccagagttccacatattacct
ttggcagatttggatgtagtacttgagccactcccagattatgtggatgctatgtactgg
gaacctgaaaatgatggcatgaacgatgataatgactcagagtacaacattactgaagaa
tattttagtgatgagcaaacttgtcctagtgacagcaaattgagtgattcagattgtagt
gaagaaaaggtcagacgaaatcaaaaagataatatgcgccggtcaaaaagaaagaaagct
ttgctagaagttgagttgatgacttcttcgggtagacgtgttaagaagagaatttcggat
gaacaagaggggacctcatccagaagtaaaagatataaaaaatcgaaaagtggtcagaag
aactctagaaggaagtctacaaaatcaaagtcattgagacctcagagagttgccgcacgt
aatgcaatccataacttttcgcagatagaagcttctgcagacgaagaagatgaagattgc
tcagtaggtgacttgtcagatagtgagtcatccatggaaggtttagccattcagagaaga
caacgtggtgacaacctgctgaatgagcaaaatatatgttcaacttctgaaagggtgtct
tctgatgggtctgaagatgtagtcaaacctcttaagcatcctgattccctggtcagtgtt
ggaagcaagaagaaattggttgtgagattttcacttcatcgtcgcacaacacctgcactt
tctgagaacaatgtaggcaaattgaagagtcaagggagtgttgcatcttcaactttgagt
ggctgcgaagaaaagccggaagaagacagggttaatcctagatcaggggatctaggttca
tcttctgcaggtgtggttgataaggaagattatggaattcagctcagagatgttgaagaa
cgaacagaagttggcaatgagttggggacatccacaagtggccgtgatgccaatgtgagt
tgggggaagttcaaaatacgcatgtcaaatggcacacagttgggagatctcgtgccaatg
aatgtgaatgctgtaagacctaatggatgctcgctgatagaaggtgaagataagccttca
ttatctgtcctaactcctcatccgcagttgaaccatgattcttttaacaagcaaactttt
gggattggggaaaaagacttacctggttctgatcttcatggatctaatagccttactgtt
gacacaaaacactctctcgtaccagagaacaatttgagaaagaagttaactgtaaaaata
aaatcaaagaaatttccaggggactctccttcctatcttcaaggcaagaccaagtcagat
gccacctcaggtgctgcaggtgagtcaacatctaaaaggccttctactgttgaggaaaaa
ccagtttttggagtgccaatggcaggcaatgctccagatgaaccaaattgtatgcctcaa
ttccatgtcaatggtgatgaagtttatgaaagtgacccaaatgtcagcttccatgaccaa
gagacaggagcagaatcacctgacatggccactgattcagctcgtagagccagatccttt
aggttgaaggctacatcacgggacactagtcgttcaaaccgtaacttggagacgggtgct
gaatatctacaaccaggtacatcaagaagtgcagagaagtcctccaagaaagccattgat
catttcccagcagagggatccagacatgctggaagatctaggtcttctaggaacaagaga
gaaaattactataggggagacaagagttctttgattgaaaaaaacatgcaccgtatgcca
aaaaaaacaaattggctattgttgtcagagcaggaggatggatatcgttacatccctcag
ctaggagatgaagttgtgtacttgcaacagggccatcaggactacttagagttgagtaag
acatctcaacctggtccttggctaaggtatggagataagattggagctgttgaagtttgt
ttggttgaagacctcaagtataccacccattctggttctggagagagctgttgtgacatc
aaacttagattcatagatacttcttctcgtgtagtcggccaaaagtttcaactgatgctg
cctgagctggatgacttcccggattttattgttgaaagaacacggtacgaagcagctatg
gagagaagctggacaagtagggataaatgcctggtgtggtggagagatgagagtgatcaa
ggtggtgcttggtgggagggccgcattactgccatcaaagacaaatctagtggtttcccc
ggaagtccatgggaaagatatcttgtcaaatacaagaatgacaatactgatttccgtcgt
cactctccttgggaactgcatgatccggacatgtcatgggagcaacccaacattgatgat
gaaaggaaagaggagatcctaagttctttaactgaattgatgcagaaagccagtaaagat
aaggataggcacggtatcataaaactgaatgaagtcgcacagaaactggatttcatgaac
aggtttcctgttccattatctccggacataatcaagtcaagggtagaaaacaattattat
agaagcctgaaggctatgaaccatgacattgaggtaatgctatcaaatgccgaatcttac
tttcagaaaaatacagagcttttgcgaaagatgaagcgcctgtcaagctggttcactcag
aacattttagacttgtag
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