Sesamum indicum (sesame): 105163093
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Entry
105163093 CDS
T04135
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105163093
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105163093
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Helicases
105163093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ATPase
nSTAND3
AAA_19
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
105163093
NCBI-ProteinID:
XP_011079618
UniProt:
A0A6I9T6C7
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All DBs
Position
LG6:656241..662431
Genome browser
AA seq
1330 aa
AA seq
DB search
MKPSRNLDAGTDLMSLESHGGDIIVLPAKKKKEKKGKNQASEKLNTKKKPKLSKSQKRKL
KKLEEEKEKEMLLSKSIETLEKYKIREDVYSLMWSSRNLGQVETVREKRRREVEFAKVGL
ELPDSAQPFKKRATNNSSQNIEVKEDKIQSQAINDSDHTQSSLAERVILNDTSISTGSCE
NEVCGDGPMTSNGEGVLSSREVAGDANQPSKPEPLPKSTQSFPQDADMIKSMDTIAGGLK
YNRNHENNRDNLSSARNNTAPTVVHVSRPEDVEKQRMGLPIVMMEQEIMEAINENISVII
CGETGCGKTTQVPQFLYEAGFGSNHLTTRGGIIGVTQPRRVAVLATAKRVAYELGHQLGK
EVGFQVRHDRRVGENCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGM
LSRVIQERQREYEEQQKRILAGETIEKNNRIFPLKLVLMSATLRVEDFVSGGRIFRTPPP
VIEVPTRQYPVTTHFSKKTEIVDYIGQAFKKVLSIHKRLPPGGILVFVTGQREVEYLCQR
LRRASRGIVANVAKGKNEASPVCKDIPPEENDIKEISEAFDFQGNSGHEITERFSSYMEE
DHGDLSEDESDVSYDSIEDSDLEFYSDEENQSKPVESDMKFSDILGAEGSLASLKTAFEA
LAGKNAPNPPAEVQDVAQTLEGTKQSSSTVEENVEKNKGLSAGPMRVLPLYAMLPASSQL
RVFEEVREGERLVIVATNVAETSLTIPGIKYVVDTGREKVKNYNSSNGMETYEIQWISKA
SASQRAGRAGRTGPGHCYRLYSSAVFNNLFPDFSSAEISKVPVDGVVLLMKSMNIGKVAN
FPFPTPPETDALIEAEHCLKVLEALDGNGRLTPLGKAMARYPMSPRHSRMLLTVIQIMQQ
VKDYARANLVLAYAVAAAAALSLANPFLVSFEGSHNDANDLNHDEKAGSEESNKVSNTEE
KSRKKKLIQAAKASREKFSNPTSDALTIAFALQCFELSGSRIEFCSENALHYKTMEEMSK
LRKQLLQLVFGSSFTDVQQEFSWIHGTFGDVECAWRVSSEKHPLLLSEEEILGQAICAGW
ADRVARRVKGASVLSEGDRKVNSARYQACMVKETVFLHRWSSLAKSPPEYLVYSELLHSK
RPYIHGATIVKSNWLVQYARPLCSFSAPLSDPKPYYNPTADQVFSWVAPTFGPHLWLLPL
HGLPMKDDFNRVAVFACSLLEGQVLPCLKAVRKFLAASPASMLKPEAWALKRVGNLLSKL
NRKGRVIDSCAKLRMLWEENPTELFPEIQDWFQEGFRIKFKELWAEMLHQAALDSKERFS
KRISKGKKKV
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttcgaggaatttggacgctggaacagatttaatgagcttggagagtcatggt
ggagacatcatcgtattgcccgcgaaaaagaagaaggaaaagaaagggaaaaatcaggca
tcggaaaagctcaatacaaaaaagaagcctaaattaagcaagtcccagaaaagaaagttg
aagaagcttgaggaggagaaggaaaaggaaatgcttctatcaaaaagcatcgagacattg
gagaagtacaagattcgagaggatgtgtattcccttatgtggtcttcaaggaacttgggt
caggttgaaactgttcgagaaaaacggagaagagaagttgagtttgctaaagtgggtttg
gaattgccagatagcgctcaacctttcaagaaaagggcaactaataattcatctcaaaac
atagaagtgaaggaggacaaaatccaatcacaggcgatcaatgacagtgaccacacacaa
tcatctttggcagaaagggtgatccttaatgacacatctatctcaacaggatcttgtgaa
aatgaagtttgtggtgatggacccatgacttctaatggggaaggtgttctttcaagcagg
gaagtggctggtgatgctaatcaaccatcaaagccagaacctcttccaaagtctactcaa
tcatttccccaggatgcagatatgattaagtctatggatacaatagctgggggtctgaaa
tataatcgtaatcatgaaaataaccgggataacctttcttcggcacgaaataacactgct
ccaacggtggtgcacgtgtcaagaccagaggatgtagaaaagcaaaggatgggtcttccc
atagtcatgatggaacaagaaataatggaagctataaatgagaatatcagtgtgattata
tgtggtgagactgggtgtggtaagacaacccaagttcctcagtttctttacgaggctggc
tttggatcaaaccatttaactactcgaggtggtattattggtgtcacccaacctcgccga
gtcgctgtacttgcaactgccaagcgagtggcatatgagcttgggcatcaattgggtaag
gaggtgggctttcaagttaggcatgaccgaagagttggagaaaattgctcaatcaagttt
atgactgatggaatcttgcttcgagaagtgcagagtgattttttgttgaaacgctactcc
gtaataattttggatgaagctcatgagaggagtctgaatacagatatactcattgggatg
ctttctcgagtcatccaagagcgtcaaagggaatatgaagagcagcagaagaggattctt
gctggcgaaactattgaaaagaataataggatattcccattgaaacttgtgctgatgagt
gctacactgcgtgtggaagattttgtgtctggtggaagaatttttcgtactcctccacct
gtgatagaagttccaacccgacaatatccagttaccacacatttttcgaagaagacagag
attgtcgattatattggtcaggcttttaagaaagttttatcaattcacaagagattgcca
ccggggggtattcttgtctttgtgacagggcagagagaggtcgagtacctttgtcagagg
ttgcgtagagcttctagagggatagttgcaaatgtagccaaaggaaaaaatgaggcttct
cctgtctgcaaagatatacctccggaagaaaatgatataaaggagatcagtgaggcattt
gattttcaaggtaactccggacatgagattactgaacgttttagttcttacatggaggag
gatcatggagatctctcagaagatgaatctgatgtatcctatgattcaatagaagacagt
gatctggaattttatagtgatgaagagaatcagtcaaaacctgtagagtctgatatgaag
ttttcagacattctgggagcagagggaagccttgcttcactgaagactgcttttgaagcc
ttagctgggaaaaatgctcccaatcctcctgctgaggtccaagatgttgcccaaacacta
gaaggcacgaagcaatccagttccactgttgaagaaaatgttgagaaaaataagggtttg
tccgctggtcctatgcgtgttctgccactttatgccatgcttcctgcttcatcccagctt
cgtgtatttgaagaggttagggaaggagaacgtcttgtcattgttgccactaatgtggcg
gagacctctttgacaattccaggaattaagtatgtagttgacactggaagagaaaaggtc
aagaattataactcttccaatggcatggaaacatatgagatacagtggatcagtaaggct
tctgcatcgcagcgtgcaggaagagctggaagaactgggccaggacactgttatcgcctg
tattcttcagcagtctttaataacttatttcctgatttctcaagtgctgaaatatcaaaa
gtgccagttgatggtgttgtcctcctcatgaaatctatgaatattggcaaggttgcaaat
tttcctttcccaacgcctccagagactgatgccttgattgaagcagagcattgtctgaag
gttcttgaagcactcgatggcaatggaaggttgacccctctggggaaggccatggctcgc
tatccaatgagtcctcgtcattccagaatgcttctcactgtcattcagattatgcaacag
gtgaaagactatgcccgagcaaatctagttttggcgtatgcagttgcagctgctgcagct
ttaagcttggcaaatccttttctagtgagttttgagggaagccacaatgatgcaaatgat
ttaaaccatgatgagaaagctggttctgaagaaagcaacaaagtttccaacacagaagaa
aaatcaaggaaaaagaaactgatacaagcagctaaagcttctcgtgaaaaattttctaac
cctaccagcgatgctttgactattgcgttcgcacttcagtgctttgaactttctggaagc
cggatagaattttgcagtgaaaatgctttgcactacaagactatggaagaaatgtccaag
ctaagaaagcagcttcttcaactagtttttggttcaagttttactgatgtacaacaggag
ttctcgtggattcatgggacttttggggatgtagaatgtgcttggagggtttcctcagag
aaacatcctcttctgctaagtgaggaggagatcttgggtcaggctatctgtgctggctgg
gctgatcgggttgctagacgtgttaaaggagcttcagttttgtcagagggagacagaaag
gtcaattcagcacggtaccaagcttgcatggttaaagaaacagtttttctccatcgttgg
tcgtctcttgccaagtctccacctgaatatttggtatacagtgaattattgcattcgaaa
aggccatatatccatggagccacaattgtgaaatcaaactggcttgtacaatatgctcga
ccattatgtagcttctctgcaccactttcagatccaaaaccttattacaaccctacagct
gatcaagtgttctcgtgggtggctccaactttcgggccccatctctggctgcttcctttg
catggtttgcccatgaaagatgattttaatagggtagctgtgtttgcgtgttctttgctt
gaaggccaagttctgccatgcctaaaagctgtccggaaatttctggcagcctcacctgca
agcatgttgaagccggaagcatgggctcttaaacgtgtgggtaatctgttaagtaaatta
aataggaaaggaagagttatcgatagttgtgctaaactaagaatgttgtgggaagaaaat
ccaacagagttgtttccagaaattcaggactggtttcaggaagggttccgcatcaagttc
aaagaactctgggcggagatgctccaccaagctgcgttagattccaaagaaagattttca
aagaggatcagcaaagggaaaaagaaagtatga
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