Sesamum indicum (sesame): 105163185
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Entry
105163185 CDS
T04135
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105163185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105163185
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105163185
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
LRR_NXF1-5
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
105163185
NCBI-ProteinID:
XP_011079740
UniProt:
A0A6I9T6T6
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Position
LG6:complement(1119983..1123371)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLTSDKDRNAVCLVCKSWYEIERWCRRRIFVGNCYAVSPEIVIRR
FPEVRAVEIKGKPHFADFNLVPEGWGAYVYPWVAAMSAAYPLLEEIKLKRMVVTDESLEL
ISKSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVEDLSGHWLSHFPDNYT
SLVSLNISCLGSEVSFSALERLVARSPNLRTLRLNRAVPLEKLPNLLRRAPQLVELGTGA
YSAEIRSDTYSNLAEAFSACKQLKGLSGFWDVVPSYLPAMLHVCSGITSLNLSYATIQSP
DLVQLVTQCRNLQRLWVLDYIEDSGLEALAASCKDLQELRVFPSDPFGAVPNVSLTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALVAIARNRPKLIRFRLCILEPRVPDYLTLEPLDTGF
GAIVENCKELRRLSLSGLLTDRVFKYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLPRLNVEVIDERGPP
DSRPESCPVERLYVYRTVSGRRVDMPGFVWTMDEDASLRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttctcgagcacgtcttctcgttcttgacctccgac
aaagaccgaaacgctgtctgcttagtgtgtaagtcgtggtacgagattgagcggtggtgc
cgccgccgtatttttgttgggaactgctatgctgtctcgccggagatcgtgatccggcgg
ttcccggaagttagggcggtggagattaaggggaagccgcatttcgcggatttcaacctc
gtgccggagggttggggagcgtacgtgtacccctgggtcgctgcgatgtcggcggcttat
ccgttgctcgaggagattaagctcaagcgcatggtggtgacggacgagagtctcgagctg
atctccaagtcgtttaagaatttcaaagttttggtgctgtcttcttgcgagggctttacg
acggatggtctcgcgtcgattgcggctaattgcaggaatctcagagaactagatttaagg
gagagtgaagttgaggaccttagtgggcattggcttagccattttcccgacaactacacg
tcattggtgtcacttaatatatcttgcttaggctctgaagtgagtttctctgctttggag
cgcctggttgcgcggtcacctaacctgaggactcttcggctgaaccgtgctgtacccctt
gagaagctgcctaacctacttcgccgtgccccccagttggttgaattagggactggtgcc
tattcggctgaaattcgatctgatacctattcaaacctggctgaagcattctcagcctgt
aagcaactcaaaggcttgtcgggtttctgggatgtggtcccatcttatcttccagccatg
ttacatgtttgctctgggatcacttcgttgaacttaagttatgctaccattcaaagtcct
gatcttgtccagcttgttacccagtgtcgaaacttacagcgactatgggttctggattac
attgaagacagtggtctggaagctcttgctgcatcttgcaaggacctgcaggaattgagg
gtgttcccttcagatccttttggagcagtacctaatgtctctttgacagaacaagggctt
gtctctgtctcagagggctgccccaaactccagtctgtcctctatttctgccgacagatg
tctaatgctgcattagttgctattgcgaggaatcgtcctaagctgattcgcttccgactc
tgtattcttgagcctcgagttcctgattacctaaccctcgaaccacttgatactggtttt
ggagcaattgtagagaactgcaaggaattgcggcgcctttcgctgtctggcctcctcaca
gatcgtgttttcaaatatattgggacccatgccaagaaattggagatgctttctatagct
ttcgctggggatagcgacttgggcctccatcatgtgttgtctggttgtgaaagccttcgg
aaactggagatcagggactgtccttttggggacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagtaagttacggagcatgtaag
ctgcttggtcagaagttgcccaggctcaatgttgaagttatagatgagagaggtccacct
gattcaaggcccgaaagctgccccgttgagagactctatgtttaccggactgtttctgga
cgaagggttgacatgcccggttttgtctggactatggatgaagatgcatccttgagattt
tcttga
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