Sesamum indicum (sesame): 105163449
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Entry
105163449 CDS
T04135
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105163449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105163449
04121 Ubiquitin system [BR:
sind04121
]
105163449
03036 Chromosome and associated proteins [BR:
sind03036
]
105163449
03400 DNA repair and recombination proteins [BR:
sind03400
]
105163449
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105163449
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105163449
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105163449
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105163449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_UBOX
zf-C3HC4_4
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_6
zf-C3HC4_2
zf-RING_5
zf-C3HC4
RTT107_BRCT_5
PHD_NSD
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105163449
NCBI-ProteinID:
XP_011080094
UniProt:
A0A6I9THD1
LinkDB
All DBs
Position
LG6:2685511..2690484
Genome browser
AA seq
655 aa
AA seq
DB search
MSEAQSATRLLNPWVFHLQKLGLELKCPICLDLLNKPVLLPCNHIFCNFCVPKSCQCPAC
QQHYTDQDIRYASFLDNIVTIYKSLDATFNSTILPLLSSDSSAPISISTSIDQLRKKPSE
TATRGKNDYSNALTKCSVSEELDVNHALEMSPGSSPSSADAKNIEDHTNDLNSRHGSTEN
HRVKKSFGDNLGAATGGVDSNDTFHAREPKRQKKLNYGSPEAALGSHGYRQQTICHSDQA
AVSNFSAECKFKEDTSVISSLATCEELYANGSVCAFCHSSKITEGTGLLLHYAAGKEVAR
GEPDFSKAIPVHSKCIEWSPQVYFVGETIKNLEAELVRSSKLKCSSCGLKGAALGCFAKS
CRRSYHVPCALEIPECRWDCDDFLMLCPIHKTIKFPSEKSSSRKRHSGEKCSLSSQIASE
RLNFWVTSPSGPQKWVLCGSALSSEEKCLMVEFAGICGATVFKFWNPNVTHVIAATDSIG
ACSRTLKVLMAILNGRWILTMDWIKACVEANGPVDEEPYEVNLDNHGCRNGPRNGRLRAS
NNAPKLFDGLSFYFNGDFVPSYKDDLLELVRVGGGTIIESTEQTVAQEPNPQMVSTTFVV
YSHDHPQGCLATESSSFVLKRLAEAELVAKDMDAQVIPHTWILESIAACRVLPCP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggcccagagcgctacgaggttgctgaatccatgggtttttcatctccagaag
cttggactcgagctcaaatgtcctatctgtttggacttgctgaataaacctgtcctgctt
ccttgcaaccacatcttctgcaatttttgcgtaccaaaatcgtgccagtgtcctgcatgc
cagcaacactacaccgatcaagatatcagatatgcttcctttctggacaacattgtcacc
atttacaaaagtctggatgctactttcaactcgactatcttgccacttttatcttctgat
tctagtgccccgatctcaatctcaacttccattgaccaattgagaaagaaacccagtgaa
acagcaacgagggggaagaatgattacagtaatgctttaactaagtgctcagtatcagaa
gaattagatgtgaatcatgctctggaaatgtcgccgggcagctctccttcatctgctgat
gccaaaaatatagaagatcataccaatgatctgaactccagacatgggagtacagaaaat
catagagtcaagaaatcttttggcgataatttaggtgctgccactggtggagtagattct
aatgacacatttcatgcaagagaacctaagagacagaagaagctgaattatggatcacct
gaggcagctttgggaagccatggatacaggcaacaaactatttgtcattctgatcaagct
gcagtttccaacttcagtgcagaatgcaaatttaaggaagacacttctgtcatttcttcc
cttgcaacttgtgaagaattatatgcgaatggaagtgtttgtgcattttgccactcttcc
aagataacagaagggactggattactgctgcattatgcagctggaaaggaggtagcaaga
ggtgaacctgatttttccaaggccattcctgtccacagtaaatgcatagaatggagtcct
caagtttactttgttggagaaacaattaagaatttggaagctgaactggtgagatcttct
aagctcaagtgtagcagctgtgggttaaagggagcagcacttggttgctttgccaagtcc
tgcaggaggagttatcatgtgccttgtgctttggaaatcccagagtgcagatgggattgt
gatgactttttaatgctatgtcctattcacaaaacaattaaatttccaagtgaaaagtcc
agctctaggaagcgtcacagtggagaaaagtgttctctgtccagtcaaatagcatctgaa
cggttgaacttttgggtgacctcccctagtggacctcaaaaatgggttttgtgtggatct
gccctgtcttctgaagagaagtgtttgatggtcgagtttgctggaatctgtggtgctact
gtgttcaagttctggaatccaaatgttacccatgtgattgctgccacagattcaattggt
gcgtgcagcaggactctaaaggttctcatggcaattctgaatggaagatggatcctcact
atggattggataaaagcttgtgttgaagcaaatggtcctgtggatgaagaaccttatgaa
gttaatctggataatcatggttgccgtaatggtcccagaaatggcagattaagggcgtca
aataatgctcccaagcttttcgatggtctgagcttttatttcaatggggacttcgtccca
tcttacaaggatgatctcttagagttagttagagttggtggaggaaccattattgagagc
acggagcagacagttgcacaagaacccaatccacaaatggtttctacaacttttgttgtt
tatagtcacgatcaccctcagggatgtctagcaacagaatcgagttcttttgtcttgaaa
agattagcagaggcggagcttgtggcaaaagacatggatgcgcaggtcattccacacaca
tggatcttggagtcaatagctgcatgcagggtgttgccttgtccctaa
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